Factsheet for Os08t0122000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G310200.1	Wheat	cytosol, plastid	84.69	84.53
TraesCS7B01G214300.2	Wheat	nucleus	84.5	84.33
Zm00001d035140_P002	Maize	plastid	82.56	84.19
TraesCS7A01G313600.1	Wheat	nucleus	84.3	84.14
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	84.3	84.14
Zm00001d049642_P001	Maize	cytosol, plastid	80.04	82.27
OQU79819	Sorghum	cytosol	84.11	82.04
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	57.95	73.65
Solyc02g067980.2.1	Tomato	nucleus	72.29	71.18
CDX98102	Canola	cytosol, plastid	63.37	70.63
PGSC0003DMT400017950	Potato	plastid	71.32	70.23
KRG94414	Soybean	plastid	70.74	69.79
Os04t0485100-01	Rice	plasma membrane	68.8	69.74
PGSC0003DMT400045008	Potato	cytosol, plastid	67.64	69.52
Solyc05g014340.2.1	Tomato	cytosol	67.44	69.32
Os03t0844500-01	Rice	cytosol	69.38	69.25
Solyc02g093800.2.1	Tomato	plastid	70.16	69.22
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	68.99	69.13
PGSC0003DMT400052115	Potato	plastid	69.57	69.04
Bra025178.1-P	Field mustard	cytosol, plastid	66.67	68.8
AT1G13460.2	Thale cress	cytosol, plastid	65.12	68.29
KRH57624	Soybean	cytosol, mitochondrion	69.96	67.6
CDY30030	Canola	plastid	64.15	66.73
VIT_14s0219g00010.t01	Wine grape	cytosol	16.67	66.67
CDX83578	Canola	cytosol	62.21	66.6
Bra019720.1-P	Field mustard	plastid	63.57	66.53
KRG94343	Soybean	cytosol, plastid	68.8	66.23
KRH31415	Soybean	cytosol, plastid	66.47	65.83
KRG97478	Soybean	cytosol, plastid	65.31	65.18
Bra036352.1-P	Field mustard	cytosol, plastid	66.47	64.84
Os07t0274800-02	Rice	extracellular, plasma membrane	64.73	64.6
CDY13605	Canola	cytosol, plastid	62.02	62.87
AT3G26020.4	Thale cress	cytosol, plastid	62.02	60.49
PGSC0003DMT400034814	Potato	cytosol	23.26	56.87
Os01t0178400-01	Rice	cytosol	21.9	55.12
Os03t0681800-00	Rice	plasma membrane	56.98	54.95
Os05t0178400-01	Rice	plasma membrane	49.42	51.93
CDY50168	Canola	cytosol	15.5	49.69
Os05t0555100-01	Rice	plastid	41.47	47.66
Os09t0542700-00	Rice	cytosol	32.36	34.65

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:4344549	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAD10591.1
ProteinID:BAD10800.1	ProteinID:BAD10832.1	ProteinID:BAF22798.1	ProteinID:BAT03610.1	ProteinID:EEE67962.1	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	InterPro:IPR011989	EnsemblPlantsGene:Os08g0122000	EnsemblPlants:Os08t0122000-01
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF17	UniProt:Q6YX33
SUPFAM:SSF48371	UniParc:UPI00000A7201	RefSeq:XP_015650434.1	SEG:seg	:	:

Description

PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B' tetaSimilar to Protein phosphatase 2A B' regulatory subunit. (Os08t0122000-01);Similar to Protein phosphatase 2A B' regulatory subunit. (Os08t0122000-02)

Coordinates

chr8:-:1205886..1209749

Molecular Weight (calculated)

58971.4 Da

IEP (calculated)

7.217

GRAVY (calculated)

-0.276

Length

516 amino acids

Sequence
(BLAST)

001: MIKQILGRLP KKEKPGKSGE KDLAGVGSSL PDARTTTDLT MSSRIANPNN YTAAVTNPGQ NYTVKNAHHG GAGVSNGFLA PPVFEALPSL RDAPAPEKPS
101: LFLRKVVMCY VVFDFTDPTK DVKEKEIKRQ TLLELVDYVT SATGKFPEPA VQEVIKMVST NLFRVPNPAP RENKPLESFD MEEEEPVMDP AWPHLQIVYE
201: LFLRFVQSPE TDAKLAKRYV DHGFIIKLLD LFDSEDPRER EYLKTILHRI YGKFMVHRPF IRKAINNIFY RFIFETEKHN GIAELLEILG SIINGFALPL
301: KEEHKLFLVR ALIPLHKPKC VSMYHQQLSY CVTQFVEKDC KLADTVIRGL LKYWPITNSA KEVMFLGELE EVLEATQPAE FQRCMVSLFC QIARCLNSSH
401: FQVAERALFL WNNDHIEVLI KQNSKVILPI ILPAIERNTK EHWNQAVQSL SLNVRKIFMD HDPVLFEECL KKFEEDEAKE TALRSKREAT WKRLEEIASS
501: KTISSEPAVP PEATVH

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.