CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98102	Canola	cytosol, plastid	93.15	99.78
AT1G13460.2	Thale cress	cytosol, plastid	87.3	88.01
CDX83578	Canola	cytosol	76.41	78.63
CDY13605	Canola	cytosol, plastid	75.6	73.67
PGSC0003DMT400045008	Potato	cytosol, plastid	70.56	69.72
Solyc05g014340.2.1	Tomato	cytosol	70.56	69.72
KRH31415	Soybean	cytosol, plastid	71.37	67.95
KRG97478	Soybean	cytosol, plastid	70.77	67.89
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	68.95	66.41
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	66.33	65.41
HORVU2Hr1G083850.1	Barley	cytosol	65.93	65.4
TraesCS2A01G320700.2	Wheat	mitochondrion	66.13	65.21
Os04t0485100-01	Rice	plasma membrane	66.73	65.03
TraesCS2D01G341400.3	Wheat	mitochondrion	65.93	65.01
HORVU5Hr1G120550.1	Barley	nucleus, plastid	66.94	64.97
TraesCS7D01G310200.1	Wheat	cytosol, plastid	67.54	64.8
EER93109	Sorghum	cytosol, plastid	67.74	64.74
TraesCS7B01G214300.2	Wheat	nucleus	67.34	64.6
TraesCS4A01G341600.1	Wheat	plastid	66.53	64.58
TraesCS5B01G533000.1	Wheat	plastid	66.73	64.52
TraesCS5D01G531300.1	Wheat	plastid	66.73	64.52
KXG26587	Sorghum	mitochondrion	66.33	64.51
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	67.14	64.41
OQU79819	Sorghum	cytosol	68.55	64.27
TraesCS7A01G313600.1	Wheat	nucleus	66.94	64.22
Os08t0122000-01	Rice	plasma membrane	66.73	64.15
Os03t0844500-01	Rice	cytosol	66.73	64.02
CDY22925	Canola	plastid	63.51	63.77
CDY48287	Canola	plastid	63.1	63.1
CDY09766	Canola	mitochondrion, plastid	58.67	62.58
CDY44320	Canola	cytosol, plastid	63.91	62.4
CDX90593	Canola	cytosol, plastid	58.27	62.28
CDY38628	Canola	cytosol, mitochondrion	63.91	62.28
CDX83579	Canola	cytosol	59.27	61.89
CDY13606	Canola	cytosol	58.87	61.6
Os07t0274800-02	Rice	extracellular, plasma membrane	63.31	60.73
CDY41574	Canola	cytosol	59.48	60.45
CDY54611	Canola	cytosol	59.48	60.2
CDX87083	Canola	cytosol	42.54	59.94
OQU88848	Sorghum	cytosol	60.89	59.92
CDX73997	Canola	cytosol, plastid	58.87	59.71
HORVU0Hr1G004960.2	Barley	cytosol	59.68	59.56
CDY07942	Canola	cytosol, plastid	58.87	59.47
CDY50168	Canola	cytosol	18.95	58.39
CDY04885	Canola	cytosol, plastid	56.45	58.09
CDY44370	Canola	cytosol, plastid	56.05	57.56
CDY05497	Canola	mitochondrion, plastid	52.82	54.02
CDY54903	Canola	mitochondrion, plastid	52.62	53.7
CDX88186	Canola	cytosol, plastid	53.23	53.33
CDX80521	Canola	plastid	53.02	53.02
CDX67616	Canola	cytosol	52.22	52.97
CDY07514	Canola	cytosol	51.81	52.56
CDY56962	Canola	cytosol, plastid	52.02	52.44
CDY08231	Canola	mitochondrion	33.67	49.55
CDX73425	Canola	cytosol, plastid	52.42	48.42
CDY67412	Canola	mitochondrion	29.64	45.37
CDY35507	Canola	golgi	26.21	42.9
CDY04189	Canola	cytosol, golgi, nucleus	17.34	37.89
CDY40986	Canola	nucleus, plastid	59.27	30.82
CDX99733	Canola	nucleus, plastid	59.88	29.35

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078GU90	UniProt:A0A078GU90	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY30030	ProteinID:CDY30030	ProteinID:CDY30030.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00044565001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0004EEA285
SEG:seg	:	:	:	:	:

Description

BnaC05g09900DBnaC05g09900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU90]

Coordinates

chrLK032248:-:8423..10679

Molecular Weight (calculated)

56870.4 Da

IEP (calculated)

8.792

GRAVY (calculated)

-0.444

Length

496 amino acids

Sequence
(BLAST)

001: MWKQIISKLP KKSSKNHSSS NATASTSKSS SSSDNGTGKS HAKNAAPAAK PATAPPPDPG PKDGNFKQGN GIYEALPSFK DVPNAEKQTL FLKKLSLCCV
101: LFDFSDPSKN VKEKEIKRQT LLELVDYVAT ANGKFSETVI QEAVRMVSVN IFRTLNPQPR ENKVIDALDL EEEEPSMDPS WPHLQLVYEL LLRFIASPDT
201: ETKLAKKYID QSFVTRLLDL FDSEDPRERD CLKTVLHRVY GKFMVHRPFI RKSINNVFYR FVFETEKHNG IAEFLEILGS IINGFALPLK EEHKVFLVRA
301: LIPLHKPKCL QMYHQQLSYC ITQFVEKDCK LADTVIRGLL KSWPVTNSSK EVMFLNELEE VLEATQPPEF QRCMVPLFRR VARCLNSLHF QVAERALFLW
401: NNDHIENLIK QNCKVILPII FPALERNTQK HWNQAVHSLT LNVQKIFNDN DPEFFKECLA KFRESESKEA EVEAKRQATW KRLEEIGMQK QKSSSS

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.