CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031075.1-P	Field mustard	mitochondrion	94.75	97.15
CDY35507	Canola	golgi	90.43	96.7
CDY08231	Canola	mitochondrion	88.58	85.16
CDY04885	Canola	cytosol, plastid	63.58	42.74
CDY44370	Canola	cytosol, plastid	62.65	42.03
CDY54611	Canola	cytosol	57.41	37.96
CDY41574	Canola	cytosol	57.1	37.91
CDY07942	Canola	cytosol, plastid	57.41	37.88
CDX73997	Canola	cytosol, plastid	56.79	37.63
AT5G03470.1	Thale cress	cytosol	57.41	37.58
KRH67758	Soybean	plastid	54.32	37.45
KRG96039	Soybean	cytosol, plastid	52.78	36.62
CDX87083	Canola	cytosol	39.2	36.08
KRH19952	Soybean	cytosol	52.78	35.4
KRH32554	Soybean	cytosol	52.78	35.19
Solyc09g008400.2.1	Tomato	nucleus	52.47	34.48
Solyc10g083920.1.1	Tomato	nucleus	51.54	33.94
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	51.23	33.74
VIT_08s0007g04850.t01	Wine grape	cytosol	52.16	33.67
CDX98102	Canola	cytosol, plastid	45.37	31.75
CDY56962	Canola	cytosol, plastid	45.99	30.28
CDY07514	Canola	cytosol	45.37	30.06
CDX67616	Canola	cytosol	45.37	30.06
CDY22925	Canola	plastid	45.37	29.76
CDY30030	Canola	plastid	45.37	29.64
CDY48287	Canola	plastid	45.06	29.44
CDY38628	Canola	cytosol, mitochondrion	44.75	28.49
CDY44320	Canola	cytosol, plastid	44.44	28.35
CDX73425	Canola	cytosol, plastid	46.6	28.12
CDX90593	Canola	cytosol, plastid	40.12	28.02
CDY09766	Canola	mitochondrion, plastid	39.51	27.53
CDY13606	Canola	cytosol	40.12	27.43
CDX83579	Canola	cytosol	40.12	27.37
CDY05497	Canola	mitochondrion, plastid	40.12	26.8
CDY54903	Canola	mitochondrion, plastid	39.51	26.34
CDX80521	Canola	plastid	39.81	26.01
CDX83578	Canola	cytosol	38.58	25.93
CDX88186	Canola	cytosol, plastid	38.89	25.45
CDY13605	Canola	cytosol, plastid	38.58	24.56
CDY04189	Canola	cytosol, golgi, nucleus	11.73	16.74
CDY40986	Canola	nucleus, plastid	40.12	13.63
CDX99733	Canola	nucleus, plastid	40.74	13.04
CDY50168	Canola	cytosol	5.86	11.8

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078JPT9	UniProt:A0A078JPT9	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY67412	ProteinID:CDY67412	ProteinID:CDY67412.1	ncoils:Coil	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00063514001	InterPro:IPR011989
PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0004EE38D3
SEG:seg	:	:	:	:	:

Description

BnaCnng54820DBnaCnng54820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPT9]

Coordinates

chrLK036082:+:5332..10162

Molecular Weight (calculated)

37923.6 Da

IEP (calculated)

7.160

GRAVY (calculated)

-0.434

Length

324 amino acids

Sequence
(BLAST)

001: MVHRPFIRKG INNIFYRFVY ETERHRGIGE LLEIMGSIIN VFALPMKEEH KLFLIRALIL LHKPKPIGVY HQQLAYCVVQ FVEKDYRLAD TVIRGLLKYW
101: PVTNCSKEVL FLGELEEVLE AMQPVAERSL FLWNSEHIVV LIAQNRSVIL PIIFASLEKN TESHWNQAVH GLSENIKRMF MEMDPELFEE CQQEYEEKQA
201: RSKEVEEQRQ NDHFALFKTK FFNSFDQKYY HYKIYPQQPP QQLAVNTAPP ATSISTQETS ASGVTNILYK LSKAELRSYQ LTRIEEPEED IDPDYLHYLR
301: AIGAYDSVQP QSARGKGRGH KGRR

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.