CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07514	Canola	cytosol	98.57	98.57
CDY56962	Canola	cytosol, plastid	90.39	89.84
Bra003201.1-P	Field mustard	golgi	69.73	89.5
AT3G54930.2	Thale cress	cytosol, plastid	90.59	89.13
CDX73425	Canola	cytosol, plastid	90.18	82.12
PGSC0003DMT400060086	Potato	cytosol, plastid	61.15	62.95
VIT_13s0019g04920.t01	Wine grape	plastid	57.87	62.61
GSMUA_Achr6P29780_001	Banana	mitochondrion	47.65	62.13
CDY41574	Canola	cytosol	61.96	62.09
CDY54611	Canola	cytosol	61.96	61.84
CDX73997	Canola	cytosol, plastid	61.55	61.55
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	56.03	61.02
CDY07942	Canola	cytosol, plastid	60.33	60.08
GSMUA_Achr7P17010_001	Banana	mitochondrion	50.31	59.71
CDY04885	Canola	cytosol, plastid	57.46	58.3
GSMUA_Achr7P07360_001	Banana	cytosol	49.28	58.07
CDY44370	Canola	cytosol, plastid	56.85	57.56
TraesCS4B01G026300.1	Wheat	mitochondrion	58.9	55.81
TraesCS4D01G023700.1	Wheat	mitochondrion	58.69	55.62
CDX98102	Canola	cytosol, plastid	52.56	55.51
KXG37844	Sorghum	plastid	59.3	55.34
KRH35993	Soybean	cytosol	54.81	55.26
Zm00001d013544_P002	Maize	cytosol, plastid	58.69	54.88
Os03t0681800-00	Rice	plasma membrane	58.49	53.46
Zm00001d033370_P001	Maize	plastid	60.12	53.16
CDY30030	Canola	plastid	52.97	52.22
CDY22925	Canola	plastid	52.35	51.82
CDX87083	Canola	cytosol	37.22	51.7
CDY48287	Canola	plastid	52.35	51.61
CDY09766	Canola	mitochondrion, plastid	48.88	51.4
CDY44320	Canola	cytosol, plastid	53.37	51.38
CDX90593	Canola	cytosol, plastid	48.67	51.29
CDX83578	Canola	cytosol	50.51	51.24
CDY38628	Canola	cytosol, mitochondrion	53.17	51.08
CDY13606	Canola	cytosol	48.88	50.42
CDX83579	Canola	cytosol	48.67	50.11
CDY13605	Canola	cytosol, plastid	50.72	48.72
CDY08231	Canola	mitochondrion	33.13	48.07
CDY05497	Canola	mitochondrion, plastid	46.01	46.39
CDY54903	Canola	mitochondrion, plastid	45.81	46.09
CDY67412	Canola	mitochondrion	30.06	45.37
CDX80521	Canola	plastid	45.6	44.96
CDX88186	Canola	cytosol, plastid	45.19	44.65
CDY35507	Canola	golgi	26.79	43.23
CDY50168	Canola	cytosol	12.68	38.51
CDY04189	Canola	cytosol, golgi, nucleus	14.52	31.28
CDY40986	Canola	nucleus, plastid	47.85	24.53
CDX99733	Canola	nucleus, plastid	48.47	23.42

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078BSG7	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDX67616
ProteinID:CDX67616	ProteinID:CDX67616.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00098765001	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0004EF448B	SEG:seg

Description

BnaA07g16560D

Coordinates

chrLK031787:-:1265814..1267361

Molecular Weight (calculated)

56296.9 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.292

Length

489 amino acids

Sequence
(BLAST)

001: MLNKIMKLGG KKFSKSDQDN TSGVNTVVRS SRPTTAAAPP SSTGESQSAA PSPSQTPNHP MFTAPPSLEV LPLLKDVSSS DRPLLFMKKA HMCSCQCDFS
101: DSLIMPREKE IKRQTLLELV DFLHSSSGKV NETMQSELIR MVSANMFRCL PPAHYENTGA PPEGNDPEEE EPYLEPWWPH LQLVYELLLR YVVSSEIEPK
201: TAKKFINHTF VSRLLDLFDS EDPREREYLK TVLHRIYGKF IFHRPFIRCS IYNIFYKYLY ETERCVGIGE LLEILGSVIN GFTVPMREEH VLYLVKAILP
301: LHKSKGISIF HQQLSYCVVQ FVEKDYKLAD TVIRGLLKYW PLTNCNKEVL FLGELEEVLD VTEPSEFQHC VVPLFRQIGK CLNSANFQVA ERALFLWNNE
401: HIVGLIAENK DVIFPIIFEA LERNMKGHWN QAVHGLSENV RRMFMEMDNE LFEECEKRHL ENEAKACELL EQREMTWKRL EEAASLAAN

Best Arabidopsis Sequence Match ( AT3G54930.2 )
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Arabidopsis Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.