Factsheet for Zm00001d013544_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37844	Sorghum	plastid	95.41	95.23
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	78.2	91.09
Zm00001d033370_P001	Maize	plastid	96.18	90.96
TraesCS4B01G026300.1	Wheat	mitochondrion	86.62	87.79
TraesCS4D01G023700.1	Wheat	mitochondrion	86.42	87.6
Os03t0681800-00	Rice	plasma membrane	87.57	85.61
GSMUA_Achr7P17010_001	Banana	mitochondrion	62.14	78.88
GSMUA_Achr7P07360_001	Banana	cytosol	61.57	77.59
GSMUA_Achr6P29780_001	Banana	mitochondrion	53.92	75.2
VIT_13s0019g04920.t01	Wine grape	plastid	60.04	69.47
PGSC0003DMT400060086	Potato	cytosol, plastid	60.61	66.74
Bra003201.1-P	Field mustard	golgi	45.12	61.94
KRH35993	Soybean	cytosol	56.98	61.44
Zm00001d043447_P001	Maize	cytosol	20.08	61.05
AT3G54930.2	Thale cress	cytosol, plastid	56.21	59.15
CDY07514	Canola	cytosol	54.88	58.69
CDX67616	Canola	cytosol	54.88	58.69
CDY56962	Canola	cytosol, plastid	54.88	58.33
Bra007117.1-P	Field mustard	cytosol, plastid	54.88	58.33
Zm00001d035140_P002	Maize	plastid	55.07	56.92
Zm00001d049642_P001	Maize	cytosol, plastid	54.3	56.57
Zm00001d003256_P001	Maize	cytosol, mitochondrion	52.96	54.31
Zm00001d025714_P001	Maize	mitochondrion	52.39	53.73
CDX73425	Canola	cytosol, plastid	55.07	53.63
Zm00001d037626_P001	Maize	plastid	47.61	51.23
Zm00001d038944_P003	Maize	plastid	47.42	49.5
Zm00001d039625_P001	Maize	mitochondrion, plastid	46.65	49.09
Zm00001d019363_P001	Maize	cytosol	49.71	48.24
Zm00001d005501_P001	Maize	cytosol	49.14	47.77
Zm00001d034817_P001	Maize	cytosol	53.35	46.97
Zm00001d049469_P001	Maize	mitochondrion	14.91	42.86
Zm00001d009500_P002	Maize	plastid	40.54	42.4
Zm00001d006254_P001	Maize	cytosol	32.7	36.93

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100281610	MapMan:18.4.24.1.2.3	ProteinID:AQK63838.1	ProteinID:AQK63839.1	ProteinID:AQK63841.1
InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:B7ZXD0	EMBL:BT053972	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0001917159
EnsemblPlantsGene:Zm00001d013544	EnsemblPlants:Zm00001d013544_P002	EnsemblPlants:Zm00001d013544_T002	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform

Coordinates

chr5:+:13969116..13975546

Molecular Weight (calculated)

58320.2 Da

IEP (calculated)

7.133

GRAVY (calculated)

-0.159

Length

523 amino acids

Sequence
(BLAST)

001: MFNKIIKRGN RKGARGDSAE VAARPAAPSS SSGSGGGGAG GAAPVTVNHA SRATAPSPSS PTSPHVTPSA FATNPAVGAA SPPLLEPLPL LRDVAAADRP
101: GLILRKLRLV AALFDLSDSL KHPREKEAKR QALLELVDYV QAPAQAAGAN APTRLPDHVQ EALVLAISAN IFRPLPPALH ESAAAIDPGA APDDDEEPYL
201: DPSWPHLQLV YELLLRYVVS PDTDTKVAKR YVDHAFVLRI LDLFDSEDPR EREYLKTVLH RIYGKFMVHR PFIRKAINNV FYRFIFETQR YNGIGELLEI
301: LGSIINGFAL PMKEEHKLFL ARALIPLHKP KSVVIYHQQL SYCIVEFVEK DYKLADTVIR GLLKYWPVTN CQKEVLFLGE LEEVLEATQP AEFQRCMVPL
401: FKQIARCLNS SHFQVAERAL FLWNNDHIVS LIAQNRGVIF PIIFEALERN IHSHWNQAVH GLTANVRKMF LDMDSELFEE CQQQYMDKQA KAKEMQEQRE
501: SAWRQLEAVV AAKAAGDDMV LVN

Best Arabidopsis Sequence Match ( AT5G03470.1 )
(BLAST)

001: MFKKIMKGAN RKASKAEAND SSMYGFDPPG RSGPGSNMIV NHASRGSLVP SSPNSMAAAT TQPPPMYSVE PLPLFRDVSV SERQSLFLRK LQICCFQFDF
101: TDTLKNAREK EIKRQTLLEL VDFIQSGAGK LTEVCQEEMV KMISVNIFRC LPPASHENTG QEPADLEEEE PYLEPSWPHL QLIYELLLRY IVPSDTDTKV
201: AKRYIDHSFV LRLLELFETE DPREREYLKT ILHRIYGKFM VHRPFIRKAM NHIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRALIPL
301: HKPKPIAMYH QQLSYCIVQF VEKDYKLADT VIRGLLKFWP VTNCTKEVLF LGELEEVLEA TQTVEFQRCM VPLFQQIARC LSSSNFQVAE RALFLWNNEH
401: VVGLIAQNRG VILPIIFASL EKNIESHWNQ AVHGLSANIK RMFMEMDPEL FEECQQQYEE KQAKSKQVEE QRQNRWRRLD EAVEERERED PMITS

Arabidopsis Description

B'ALPHAATB' ALPHA [Source:UniProtKB/TrEMBL;Acc:A0A178UNX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.