Factsheet for Zm00001d035140_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049642_P001	Maize	cytosol, plastid	89.53	90.24
TraesCS7D01G310200.1	Wheat	cytosol, plastid	84.39	82.59
TraesCS7B01G214300.2	Wheat	nucleus	84.39	82.59
Os08t0122000-01	Rice	plasma membrane	84.19	82.56
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	84.19	82.4
TraesCS7A01G313600.1	Wheat	nucleus	83.99	82.2
Zm00001d043447_P001	Maize	cytosol	26.28	77.33
Zm00001d003256_P001	Maize	cytosol, mitochondrion	71.15	70.59
Zm00001d025714_P001	Maize	mitochondrion	69.76	69.22
Zm00001d034817_P001	Maize	cytosol	71.34	60.77
Zm00001d019363_P001	Maize	cytosol	61.07	57.33
Zm00001d005501_P001	Maize	cytosol	60.87	57.25
Zm00001d013544_P002	Maize	cytosol, plastid	56.92	55.07
Zm00001d037626_P001	Maize	plastid	51.38	53.5
Zm00001d033370_P001	Maize	plastid	58.1	53.16
Zm00001d039625_P001	Maize	mitochondrion, plastid	51.19	52.11
Zm00001d038944_P003	Maize	plastid	51.38	51.9
Zm00001d009500_P002	Maize	plastid	45.06	45.6
Zm00001d049469_P001	Maize	mitochondrion	15.02	41.76
Zm00001d006254_P001	Maize	cytosol	33.4	36.5

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:103628994	MapMan:18.4.24.1.2.3	UniProt:A0A1D6LEP6	ProteinID:AQK78417.1	ProteinID:AQK78419.1
ProteinID:AQK78420.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF17	SUPFAM:SSF48371	UniParc:UPI000220FAFC	EnsemblPlantsGene:Zm00001d035140	EnsemblPlants:Zm00001d035140_P002
EnsemblPlants:Zm00001d035140_T002	SEG:seg	:	:	:	:

Description

Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform

Coordinates

chr6:-:6799751..6803506

Molecular Weight (calculated)

57403.3 Da

IEP (calculated)

7.816

GRAVY (calculated)

-0.267

Length

506 amino acids

Sequence
(BLAST)

001: MIKQILGRLP KKPTKAGEKE LAGAGPSLPS PTSDARTTTD LTASSRLVSP SNYASAATNP GQSYAPRAAG LGAGASNGFA GSAAGYEALP SFRDVPASEK
101: PGLLLGKLAM CCVVFDFADP TKDVREKEVK RQTLLELVDY ITSATSKFPE PVVQEVVRMV SVNLFRVPTP APRENKALES FDMEEEEPVM DPAWSHLQIV
201: YELFLRFIQS PETDAKLAKR YIDHGFIIRL LDLFDSEDPR EREYLKTILH RIYGKFMVHR PFIRKAINNI FYRFIFETEK HNGIAELLEI LGSIINGFAL
301: PLKEEHKLFL VRALIPLHKP KCVAMYHQQL SYCVTQFVEK DCKLADTVIR GLLKYWPITN SSKEVMFLGE LEEVLEATQP AEFQRCMVPL FRQIARCLSS
401: SHFQVAERAL FLWNNDHIEG LIKQNNKVIL PIIFPALERN TKGHWNQAVQ SLSLNVRKIF MDHDPALFEE CHKKFEEEEA QEAGVRSRRE ARWRRLEEIA
501: SSKSPQ

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.