Factsheet for Zm00001d025714_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26587	Sorghum	mitochondrion	96.08	96.08
Zm00001d003256_P001	Maize	cytosol, mitochondrion	95.1	95.1
Os04t0485100-01	Rice	plasma membrane	89.61	89.78
HORVU2Hr1G083850.1	Barley	cytosol	85.69	87.4
TraesCS2A01G320700.2	Wheat	mitochondrion	86.08	87.28
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	86.08	87.28
TraesCS2D01G341400.3	Wheat	mitochondrion	85.88	87.08
Zm00001d043447_P001	Maize	cytosol	24.31	72.09
HORVU0Hr1G004960.2	Barley	cytosol	70.2	72.03
Zm00001d035140_P002	Maize	plastid	69.22	69.76
Zm00001d049642_P001	Maize	cytosol, plastid	66.86	67.93
Zm00001d034817_P001	Maize	cytosol	67.65	58.08
Zm00001d019363_P001	Maize	cytosol	59.02	55.84
Zm00001d005501_P001	Maize	cytosol	58.43	55.39
Zm00001d038944_P003	Maize	plastid	52.35	53.29
Zm00001d013544_P002	Maize	cytosol, plastid	53.73	52.39
Zm00001d037626_P001	Maize	plastid	49.61	52.06
Zm00001d039625_P001	Maize	mitochondrion, plastid	50.59	51.91
Zm00001d033370_P001	Maize	plastid	54.51	50.27
Zm00001d009500_P002	Maize	plastid	45.69	46.6
Zm00001d049469_P001	Maize	mitochondrion	15.88	44.51
Zm00001d006254_P001	Maize	cytosol	32.16	35.42

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100501635	MapMan:18.4.24.1.2.3	ProteinID:AQK44351.1	InterPro:ARM-like	InterPro:ARM-type_fold
EMBL:BT085827	UniProt:C4J4T0	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0001A4C8DD	EnsemblPlantsGene:Zm00001d025714	EnsemblPlants:Zm00001d025714_P001	EnsemblPlants:Zm00001d025714_T001

Description

Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform

Coordinates

chr10:-:127160289..127165558

Molecular Weight (calculated)

58200.2 Da

IEP (calculated)

8.083

GRAVY (calculated)

-0.345

Length

510 amino acids

Sequence
(BLAST)

001: MIKQILGRLP RKPGKAGDSR EAAAAGNGTE PSNSYSVARS MDPGNKRAGN GDYPVPSGVI PNPVMNGAVV YHSNEPLPAF KDVPMSEKQN LFVKKVSLCC
101: AVYDFVDPTK NLKEKEVKRQ TLMELVDYVA SANGKFSEVV MLEITKMVSI NLFRSSSPTP RENKAIEGVD LEEDEPLMDP AWSHLQIVYE VFLRFVASQE
201: TDAKLAKRYI DHSFILRLLD LFDSEDPRER DYLKTILHRI YGKFMVHRPF IRKAINNIFY RFIFETEKHN GVAELLEILG SIINGFALPL KEEHKLFLVR
301: ALIPLHKPKC VSMYHQQLSY CITQFVEKDC KLADTVIRGL LKYWPVTNSS KEVMFLGELE EVLEATQLAE FQRCMVPLFR QISRSMNSFH FQVAERALFL
401: WNNDHIETLI KQNYKVLLPI IYPALERNSR DHWNQAVRSL TLNVRKIFSD HDSTFFGECV QRFSDEELKQ AESDSKRDAM WKRLEEMGAS KPGGNHPLGA
501: PNGKPSHAAG

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.