Factsheet for Zm00001d033370_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013544_P002	Maize	cytosol, plastid	90.96	96.18
KXG37844	Sorghum	plastid	90.96	95.99
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	75.05	92.43
TraesCS4B01G026300.1	Wheat	mitochondrion	83.0	88.95
TraesCS4D01G023700.1	Wheat	mitochondrion	82.82	88.76
Os03t0681800-00	Rice	plasma membrane	84.09	86.92
GSMUA_Achr7P17010_001	Banana	mitochondrion	59.49	79.85
GSMUA_Achr7P07360_001	Banana	cytosol	58.77	78.31
GSMUA_Achr6P29780_001	Banana	mitochondrion	52.08	76.8
VIT_13s0019g04920.t01	Wine grape	plastid	58.41	71.46
PGSC0003DMT400060086	Potato	cytosol, plastid	58.95	68.63
Zm00001d043447_P001	Maize	cytosol	19.71	63.37
Bra003201.1-P	Field mustard	golgi	43.58	63.25
KRH35993	Soybean	cytosol	54.97	62.68
AT3G54930.2	Thale cress	cytosol, plastid	54.43	60.56
CDY07514	Canola	cytosol	53.16	60.12
CDX67616	Canola	cytosol	53.16	60.12
CDY56962	Canola	cytosol, plastid	53.35	59.96
Bra007117.1-P	Field mustard	cytosol, plastid	53.35	59.96
Zm00001d035140_P002	Maize	plastid	53.16	58.1
Zm00001d049642_P001	Maize	cytosol, plastid	52.62	57.97
CDX73425	Canola	cytosol, plastid	53.53	55.12
Zm00001d003256_P001	Maize	cytosol, mitochondrion	50.63	54.9
Zm00001d025714_P001	Maize	mitochondrion	50.27	54.51
Zm00001d037626_P001	Maize	plastid	45.75	52.06
Zm00001d039625_P001	Maize	mitochondrion, plastid	45.39	50.5
Zm00001d038944_P003	Maize	plastid	45.03	49.7
Zm00001d019363_P001	Maize	cytosol	47.92	49.17
Zm00001d005501_P001	Maize	cytosol	47.38	48.7
Zm00001d034817_P001	Maize	cytosol	51.18	47.64
Zm00001d049469_P001	Maize	mitochondrion	14.83	45.05
Zm00001d009500_P002	Maize	plastid	38.88	43.0
Zm00001d006254_P001	Maize	cytosol	31.28	37.37

Protein Annotations

EntrezGene:100280472	MapMan:18.4.24.1.2.3	UniProt:A0A1D6KYH2	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	ProteinID:ONM07463.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0008455B05
EnsemblPlantsGene:Zm00001d033370	EnsemblPlants:Zm00001d033370_P001	EnsemblPlants:Zm00001d033370_T001	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform

Coordinates

chr1:+:260837492..260857730

Molecular Weight (calculated)

61758.4 Da

IEP (calculated)

7.518

GRAVY (calculated)

-0.220

Length

553 amino acids

Sequence
(BLAST)

001: MFNKIIKRGN RKGARGDNAE AAARPAAPSS SSGSGGGGAG AAAPVTVNHA SRATAPSPSS PTSPHVAPSA LATNPAGAAS PPLLEPLPLL RDVAAADRPG
101: LFLRKLRIVA ALFDLSDSLK HPREKEAKRQ ALLELVDYVQ APAQAAGANA PTRLPDHVQE ALVAAISANI FRPLPPALHE SAAAIDPGAA PDEEEEPYLD
201: PSWPHLQLVY ELLLRYVVSP DTDTKVAKRY VDHAFVLRLL DLFDSEDPRE REYLKTVLHR IYGKFMVHRP FIRKAINNVF YRFIFETQRH NGIGELLEIL
301: GSIINGFALP MKEEHKLFLA RALIPLHKPK SVAIYHQQLS YCIVQFVEKD YKLADTVIRG LLKYWPVTNC QKEVLFLGEL EEVLEATQPA EFQRCMVPLF
401: KQIGRCLNSS HFQRPLEPPV HIGIVRRDGN GNREMGRLKL TWEEVAERAL FLWNNDHIVS LIAQNRVVIF PIIFEALERN IQSHWNQAVH GLTANVRKMF
501: LDMDSELFEE CQQQYMEKQA KAKEIQEQRE SAWRQLEAVV AAKAAGDDMV LVN

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.