Factsheet for GSMUA_Achr6P29780_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P07360_001	Banana	cytosol	69.87	63.13
GSMUA_Achr7P17010_001	Banana	mitochondrion	69.33	63.11
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	75.47	63.03
VIT_13s0019g04920.t01	Wine grape	plastid	70.93	58.85
Bra003201.1-P	Field mustard	golgi	58.13	57.22
TraesCS4D01G023700.1	Wheat	mitochondrion	75.47	54.84
KXG37844	Sorghum	plastid	76.27	54.58
TraesCS4B01G026300.1	Wheat	mitochondrion	74.93	54.46
PGSC0003DMT400060086	Potato	cytosol, plastid	68.8	54.32
Zm00001d013544_P002	Maize	cytosol, plastid	75.2	53.92
Os03t0681800-00	Rice	plasma membrane	76.53	53.64
Zm00001d033370_P001	Maize	plastid	76.8	52.08
AT3G54930.2	Thale cress	cytosol, plastid	65.87	49.7
Bra007117.1-P	Field mustard	cytosol, plastid	63.73	48.58
CDY56962	Canola	cytosol, plastid	63.73	48.58
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	56.8	48.52
KRH35993	Soybean	cytosol	62.4	48.25
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	50.13	47.84
GSMUA_Achr8P32030_001	Banana	cytosol	61.33	47.82
CDX67616	Canola	cytosol	62.13	47.65
CDY07514	Canola	cytosol	62.13	47.65
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	61.87	47.54
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	58.67	47.21
CDX73425	Canola	cytosol, plastid	63.73	44.51
GSMUA_AchrUn_...	Banana	cytosol	30.67	43.56
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	54.93	42.74
GSMUA_AchrUn_...	Banana	cytosol	53.6	42.68
GSMUA_Achr8P26100_001	Banana	cytosol	53.87	42.08
GSMUA_AchrUn_...	Banana	cytosol	14.67	39.29
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	16.27	30.96
GSMUA_Achr3P00600_001	Banana	mitochondrion	39.73	29.92

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr6G29780_001	EnsemblPlants:GSMUA_Achr6P29780_001	EnsemblPlants:GSMUA_Achr6T29780_001
InterPro:IPR011989	UniProt:M0TBC3	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0002960D8D	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:GMGC_GENE;Acc:GSMUA_Achr6G29780_001]

Coordinates

chr6:+:29948942..29952452

Molecular Weight (calculated)

43117.3 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.062

Length

375 amino acids

Sequence
(BLAST)

001: MITLRCARER ELVRTIATNI FRCLPPAAHE NTGSEAAAAA AAADPEEENI FLDPAWPHLQ LVYELLLRYV VSSDTDAKVA KRFIDHAFVL RVLDLFDSGD
101: PREREYLKTI LHRIYGKFMV HRPFIRKAIS NIFYRFIFET EQHSGIGELL DILGSIINGF ALPMKEEHKL FLVRVLIPLH KTKPAGVYHH QLAYCTTQFV
201: EKDCKLAYTV IRGLLKYWPV TNCQKELLFL GELEEVLETT QPTEFQQCMV PLFKQISRCL NSSHFQVAER ALYLWNNDHI VSLISQNCSI ILPVIFEALE
301: KNMQSHWNQA IHGLTANVRK MFQDMDGDLF EDCRQQYIER VASAKTLEEQ RELAWRQLEA VAAAKAAGEA IILVN

Best Arabidopsis Sequence Match ( AT3G54930.2 )
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Arabidopsis Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.