Factsheet for GSMUA_Achr8P26100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	62.5	76.34
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	76.04	75.73
GSMUA_AchrUn_...	Banana	cytosol	73.96	75.37
EES03447	Sorghum	plastid	66.46	63.8
EES18643	Sorghum	plastid	66.04	63.27
TraesCS1D01G390600.1	Wheat	plastid	64.79	62.2
CDX87083	Canola	cytosol	45.42	61.93
Zm00001d038944_P003	Maize	plastid	64.58	61.88
TraesCS1A01G382900.2	Wheat	plastid	64.17	61.85
TraesCS1B01G408600.1	Wheat	plastid	63.96	61.4
VIT_04s0008g04270.t01	Wine grape	mitochondrion	60.83	59.35
KRH05059	Soybean	cytosol, mitochondrion, plastid	58.96	57.52
KRH16045	Soybean	cytosol, mitochondrion, plastid	58.75	57.32
KRH52526	Soybean	cytosol	59.17	57.14
KRH61853	Soybean	plastid	58.96	57.06
Os05t0555100-01	Rice	plastid	52.92	56.57
VIT_11s0016g04500.t01	Wine grape	cytosol	62.5	56.18
CDY05497	Canola	mitochondrion, plastid	56.67	56.08
CDY54903	Canola	mitochondrion, plastid	56.67	55.97
Bra020504.1-P	Field mustard	mitochondrion, plastid	56.04	55.24
Solyc12g006920.1.1	Tomato	plastid	57.92	54.94
PGSC0003DMT400002753	Potato	plastid	57.92	54.94
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	57.08	54.8
Solyc06g065690.2.1	Tomato	cytosol, plastid	56.46	54.42
Zm00001d009500_P002	Maize	plastid	56.67	54.4
PGSC0003DMT400067211	Potato	cytosol, plastid	56.25	54.22
Bra009846.1-P	Field mustard	plastid	55.83	54.14
CDX80521	Canola	plastid	55.83	54.03
CDX88186	Canola	cytosol, plastid	55.62	53.94
GSMUA_Achr6P29780_001	Banana	mitochondrion	42.08	53.87
KRH03791	Soybean	cytosol	57.5	53.7
KRH56674	Soybean	cytosol	56.67	52.82
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	47.92	52.39
GSMUA_Achr8P32030_001	Banana	cytosol	51.46	51.35
GSMUA_AchrUn_...	Banana	cytosol	28.12	51.14
GSMUA_Achr7P07360_001	Banana	cytosol	43.96	50.84
GSMUA_Achr7P17010_001	Banana	mitochondrion	43.54	50.73
HORVU1Hr1G084450.3	Barley	plastid	64.17	50.0
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	50.42	49.59
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	45.42	46.78
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.33	44.67
GSMUA_AchrUn_...	Banana	cytosol	11.25	38.57
GSMUA_Achr3P00600_001	Banana	mitochondrion	29.58	28.51

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr8G26100_001	EnsemblPlants:GSMUA_Achr8P26100_001	EnsemblPlants:GSMUA_Achr8T26100_001
InterPro:IPR011989	UniProt:M0TTR3	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI000296F476	SEG:seg	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Source:GMGC_GENE;Acc:GSMUA_Achr8G26100_001]

Coordinates

chr8:+:29776261..29779959

Molecular Weight (calculated)

54910.6 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.191

Length

480 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP HKSFQSDASL DLTHLPPGNN GTGSVNGNSI HRTNSDNVVS SRSTTMKRTA SAIFPSNVVT SAEPLLLFKD VPNAEKQNLF INLIGYVDAG
101: TSRFTEPVIS ASCKMIAINL FRAFPPNTRS GNGGGEAEEE VPVYDSAWTH LQLVYDLLQK FIESSYLDSK IGKKYIDHSF VMRLLDLFDS EDPRERDCLK
201: TILHRIYGKF MVHRPFIRKA VSNIFYRFVF ETDRHNGIVE ILEVFGSVIS GFAQPLKEEH KLLLWRVVMP LHKPKTLGVY QQQLTYCVTQ FIEKEPKLAS
301: SVIKGLLRYW PVTSSQKEVM FLSELEEILE ATNTAELQGC MIPLFRRIGF CINSSHFQVA ERALFLWNNN HVINLMAQNR QAIMPLVLPA LERNLQSHWN
401: QTVLNLTQYV KKMFSEMDEE LVLACKKKFE EKEKKQKTME EKRRLIWEHM ETSTAFHPVT RNTTVLVVPV IAPPIAAALT

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.