CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61853	Soybean	plastid	96.38	96.57
KRH16045	Soybean	cytosol, mitochondrion, plastid	82.5	83.33
KRH05059	Soybean	cytosol, mitochondrion, plastid	82.09	82.93
VIT_04s0008g04270.t01	Wine grape	mitochondrion	73.04	73.78
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	73.44	73.0
CDX87083	Canola	cytosol	51.11	72.16
CDY54903	Canola	mitochondrion, plastid	70.02	71.6
CDY05497	Canola	mitochondrion, plastid	69.82	71.55
Bra020504.1-P	Field mustard	mitochondrion, plastid	69.62	71.05
PGSC0003DMT400067211	Potato	cytosol, plastid	70.62	70.48
Solyc06g065690.2.1	Tomato	cytosol, plastid	70.62	70.48
CDX88186	Canola	cytosol, plastid	69.62	69.9
CDX80521	Canola	plastid	69.62	69.76
Bra009846.1-P	Field mustard	plastid	69.22	69.49
TraesCS1A01G382900.2	Wheat	plastid	67.0	66.87
TraesCS1D01G390600.1	Wheat	plastid	67.0	66.6
TraesCS1B01G408600.1	Wheat	plastid	66.8	66.4
EES03447	Sorghum	plastid	66.2	65.8
EES18643	Sorghum	plastid	66.2	65.67
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	63.38	65.35
Zm00001d038944_P003	Maize	plastid	65.59	65.07
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	48.69	61.58
GSMUA_AchrUn_...	Banana	cytosol	58.35	61.57
HORVU3Hr1G022550.2	Barley	cytosol	47.28	60.88
KRG90768	Soybean	extracellular, mitochondrion	11.47	60.64
GSMUA_Achr8P26100_001	Banana	cytosol	57.14	59.17
KRH03791	Soybean	cytosol	61.17	59.14
KRH56674	Soybean	cytosol	60.97	58.84
Zm00001d009500_P002	Maize	plastid	58.75	58.4
Os05t0555100-01	Rice	plastid	52.72	58.35
KRG96039	Soybean	cytosol, plastid	54.73	58.24
KRH67758	Soybean	plastid	54.73	57.87
Os01t0178400-01	Rice	cytosol	23.54	57.07
EES19134	Sorghum	plastid	54.93	56.41
Zm00001d037626_P001	Maize	plastid	55.13	56.38
EES00199	Sorghum	cytosol, mitochondrion, plastid	56.14	55.47
Os05t0178400-01	Rice	plasma membrane	54.73	55.4
Zm00001d039625_P001	Maize	mitochondrion, plastid	55.33	55.33
KRH32554	Soybean	cytosol	53.72	54.94
TraesCS3D01G123500.1	Wheat	plastid	53.32	54.87
KRH19952	Soybean	cytosol	53.32	54.87
TraesCS3B01G140800.1	Wheat	plastid	53.52	54.73
TraesCS3A01G121400.1	Wheat	plastid	53.12	54.66
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	53.12	54.32
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	52.92	54.12
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	52.72	53.91
HORVU1Hr1G084450.3	Barley	plastid	66.6	53.73
KRG94414	Soybean	plastid	56.54	53.73
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	52.52	53.7
KRG97478	Soybean	cytosol, plastid	55.53	53.38
KRH31415	Soybean	cytosol, plastid	55.73	53.17
KRH14754	Soybean	cytosol, plastid	56.74	52.61
KRH73387	Soybean	cytosol, plastid	56.54	52.33
KRH57624	Soybean	cytosol, mitochondrion	56.14	52.25
KRH35993	Soybean	cytosol	50.1	51.34
KRG94343	Soybean	cytosol, plastid	54.93	50.93
KRH36100	Soybean	plastid	35.41	38.51

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100808283	MapMan:18.4.24.1.2.3	EMBL:ACUP02003423	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_06G073000	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1K903	InterPro:IPR011989	EnsemblPlants:KRH52526	ProteinID:KRH52526	ProteinID:KRH52526.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI000233A455
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:5626756..5630100

Molecular Weight (calculated)

56477.5 Da

IEP (calculated)

8.076

GRAVY (calculated)

-0.137

Length

497 amino acids

Sequence
(BLAST)

001: MLKQFLSKLP RKAPKPDSDE SCRADSSSSD DSPHAAGRNT RPPGGGGASG AAKKASSSAV FPASTVSLIE PLVPFKDVPS SEKMNLFVSK LSLCCVTFDF
101: TDPGKNTVEK EVKRRTLVEL VDFVSSCGSS RFGEPAILAV CRMCAINLFR VFPPNYRSNR GGENDDDEPA FDPAWPHLQL VYELLLKFIT SNCLDAKVAK
201: KYIDHSFILS LLELFDSEDP RERDCLKTIL HRVYGKFMVH RPYIRKSINN LFYKFVFETE RHNGIAELLE IFGSIISGFA LPLKEEHKIF LWRVLIPLHK
301: PKSIGVYFQQ LSYCVTQFIE KEPKLASIVI RGMLKYWPVT NSQKEVMFLG ELEEILETIN MVEFQRVMVP LFWRIGCCIN SLHFQVAERT LFLWNNDHIV
401: NLIAHNRQVI LPIIFPALEK NSQGHWSQAV LNLTHNVRKM FVEMDEKLFL ASHSQFKEEE AMLNTAAEKR KEAWKQLEHA ASLQPVTGNT PVLVSPI

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.