CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	64.82	83.5
KRH57624	Soybean	cytosol, mitochondrion	83.17	81.46
KRG94343	Soybean	cytosol, plastid	82.79	80.78
PGSC0003DMT400052115	Potato	plastid	78.97	79.42
Solyc02g067980.2.1	Tomato	nucleus	79.16	79.01
Solyc02g093800.2.1	Tomato	plastid	78.39	78.39
PGSC0003DMT400017950	Potato	plastid	77.44	77.29
VIT_14s0219g00010.t01	Wine grape	cytosol	18.74	75.97
EER93109	Sorghum	cytosol, plastid	70.94	71.48
Os08t0122000-01	Rice	plasma membrane	69.79	70.74
Os03t0844500-01	Rice	cytosol	69.79	70.6
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	67.11	69.78
HORVU2Hr1G083850.1	Barley	cytosol	66.54	69.6
TraesCS2D01G341400.3	Wheat	mitochondrion	66.92	69.58
Os04t0485100-01	Rice	plasma membrane	67.69	69.55
KRH31415	Soybean	cytosol, plastid	69.22	69.48
KRG97478	Soybean	cytosol, plastid	68.64	69.44
TraesCS4A01G341600.1	Wheat	plastid	67.69	69.28
Os07t0274800-02	Rice	extracellular, plasma membrane	68.45	69.25
KXG26587	Sorghum	mitochondrion	67.5	69.22
TraesCS2A01G320700.2	Wheat	mitochondrion	66.54	69.18
HORVU5Hr1G120550.1	Barley	nucleus, plastid	67.5	69.08
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	68.07	68.86
TraesCS5D01G531300.1	Wheat	plastid	67.5	68.81
TraesCS5B01G533000.1	Wheat	plastid	67.3	68.62
TraesCS7B01G214300.2	Wheat	nucleus	67.69	68.47
TraesCS7D01G310200.1	Wheat	cytosol, plastid	67.3	68.09
TraesCS7A01G313600.1	Wheat	nucleus	67.11	67.89
Zm00001d043447_P001	Maize	cytosol	21.99	66.86
OQU79819	Sorghum	cytosol	67.5	66.73
OQU88848	Sorghum	cytosol	63.86	66.27
KRH73387	Soybean	cytosol, plastid	67.11	65.36
KRG90768	Soybean	extracellular, mitochondrion	11.66	64.89
KRH14754	Soybean	cytosol, plastid	66.35	64.74
KRG96039	Soybean	cytosol, plastid	56.6	63.38
KRH67758	Soybean	plastid	56.6	62.98
KRH32554	Soybean	cytosol	57.17	61.52
HORVU0Hr1G004960.2	Barley	cytosol	58.32	61.37
KRH19952	Soybean	cytosol	56.6	61.28
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	21.99	58.38
KRH61853	Soybean	plastid	53.73	56.65
KRH52526	Soybean	cytosol	53.73	56.54
KRH16045	Soybean	cytosol, mitochondrion, plastid	52.77	56.1
KRH05059	Soybean	cytosol, mitochondrion, plastid	52.39	55.69
KRH35993	Soybean	cytosol	51.24	55.26
KRH56674	Soybean	cytosol	51.63	52.43
KRH03791	Soybean	cytosol	50.29	51.17
KRH36100	Soybean	plastid	33.08	37.86

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100814863	MapMan:18.4.24.1.2.3	EMBL:ACUP02011955	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_19G082900	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:K7MX94	ProteinID:KRG94411.1	ProteinID:KRG94412.1	ProteinID:KRG94413.1	EnsemblPlants:KRG94414
ProteinID:KRG94414	ProteinID:KRG94414.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000233ED4F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:+:30065338..30071975

Molecular Weight (calculated)

59973.4 Da

IEP (calculated)

7.809

GRAVY (calculated)

-0.285

Length

523 amino acids

Sequence
(BLAST)

001: MIKQILNRLQ RKPSKSVENH EGGGAITSPS TTSTSSRSSD LARFHYGNST ASPLSGLNSN SFPGLNHGDK FPHAVNSKLN GSLAASSYEA LPSFKDVPNS
101: EKQNLFIRKV QMCCFVFDFT DPTKNLKEKD IKRQTLVELV DYVSSANSKF TEIMMQEIVK MVSVNLFRTW TSPLRENKVL EAFDVEDEEP LMDPAWPHFQ
201: IVYELLLRFV ASPETDAKLA KRYVDHSFVL KLLDLFDSED PRERDYLKTV LHRIYGKFMV HRPFIRKAIN NIFYQFIFET EKHNGIAELL EILGSIINGF
301: ALPLKEEHKL FLARVLIPLH KPKCIPIYHQ QLSYCITQFV EKDCKLADTV IQGLLKYWPI TNSSKEVMFL GELEEILEVT QPAEFQRCMV PLFHQISRCL
401: SSSHFQVAER ALFLWNNDHI ENLIKQNCKI ILPIVLPALE KNARNHWNQA VQSLTINVRK IFADTDPELL EECLRKFKED EAQEKALKLK REATWKRLEE
501: IAAMKAASNE PVLVSPRTAS SSG

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.