Factsheet for PGSC0003DMT400052115

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093800.2.1	Tomato	plastid	96.35	95.79
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	65.38	83.74
PGSC0003DMT400017950	Potato	plastid	83.65	83.02
KRG94414	Soybean	plastid	79.42	78.97
VIT_14s0219g00010.t01	Wine grape	cytosol	19.04	76.74
KRH57624	Soybean	cytosol, mitochondrion	75.96	73.97
KRG94343	Soybean	cytosol, plastid	75.38	73.13
PGSC0003DMT400045008	Potato	cytosol, plastid	70.19	72.71
Os04t0485100-01	Rice	plasma membrane	70.38	71.91
EER93109	Sorghum	cytosol, plastid	70.96	71.1
Os03t0844500-01	Rice	cytosol	70.58	70.99
KXG26587	Sorghum	mitochondrion	69.62	70.98
HORVU2Hr1G083850.1	Barley	cytosol	67.69	70.4
TraesCS2D01G341400.3	Wheat	mitochondrion	67.88	70.18
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	67.88	70.18
TraesCS2A01G320700.2	Wheat	mitochondrion	67.69	69.98
Os08t0122000-01	Rice	plasma membrane	69.04	69.57
TraesCS4A01G341600.1	Wheat	plastid	68.27	69.47
HORVU5Hr1G120550.1	Barley	nucleus, plastid	68.27	69.47
TraesCS5B01G533000.1	Wheat	plastid	68.46	69.4
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	68.85	69.25
TraesCS5D01G531300.1	Wheat	plastid	68.27	69.2
TraesCS7B01G214300.2	Wheat	nucleus	68.27	68.67
TraesCS7A01G313600.1	Wheat	nucleus	67.88	68.28
TraesCS7D01G310200.1	Wheat	cytosol, plastid	67.88	68.28
OQU79819	Sorghum	cytosol	68.65	67.49
Os07t0274800-02	Rice	extracellular, plasma membrane	66.73	67.12
OQU88848	Sorghum	cytosol	64.42	66.47
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	67.31	64.22
PGSC0003DMT400034814	Potato	cytosol	25.77	63.51
HORVU0Hr1G004960.2	Barley	cytosol	59.42	62.17
PGSC0003DMT400060086	Potato	cytosol, plastid	54.81	60.0
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	56.54	59.76
PGSC0003DMT400067211	Potato	cytosol, plastid	52.12	54.42
PGSC0003DMT400002753	Potato	plastid	50.38	51.78
PGSC0003DMT400008785	Potato	cytosol	33.27	42.51

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102593611	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M1BSU3
PFAM:PF01603	EnsemblPlantsGene:PGSC0003DMG400020228	PGSC:PGSC0003DMG400020228	EnsemblPlants:PGSC0003DMT400052115	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0002964DA6	RefSeq:XP_006338659.1	RefSeq:XP_006338660.1
RefSeq:XP_006338661.1	RefSeq:XP_015163110.1	SEG:seg	:	:	:

Description

Protein phosphatase 2a, regulatory subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400020228]

Coordinates

chr2:-:47703552..47710492

Molecular Weight (calculated)

59465.5 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.343

Length

520 amino acids

Sequence
(BLAST)

001: MIKQILNRLP RKPSKSAENR DGGSSASPSN ASTSSRSSDL STAQSGNSSA TTVSGVTSST LGPNHGNRLP QAANAKVNGS AVCETLPSFK DVPTAEKQTL
101: FIKKLNLCCV LFDFTDPTKH LKEKDIKRQT LVELVDYISS VNVKFTETVI QEIVKMVSSN LFRPLTSQPR ENKVLEAFDL EDDEPLMDPA WSHLQIVYEF
201: FLRFVASPET DAKLSKRYVD HSFVLRLLDL FDSEDPRERE FLKTVLHRIY GKFMVHRPFI RKSINNIFYR FIFETEKHNG IAELLEILGS IINGFALPLK
301: EEHKLFLVRA LIPLHKPKCV HMYHQQLSYC ITQFVEKDCK LADTVIRGLL KYWPITNSSK EVVFLGELEE VLEATQPPEF QRCMVPLFHQ ISRCLSSSHF
401: QVAERALFLW NNNHVENLIK QNRKVILPII FPALEKNARG HWNQAVQNLT LNVRKIFSDI DSELFEECLQ KFEEDKAQEE EVKRKREITW KRLEELAGMK
501: AASNEPVLVS HKTTPHSPSG

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.