Factsheet for PGSC0003DMT400002753

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g006920.1.1	Tomato	plastid	98.22	98.22
VIT_11s0016g04500.t01	Wine grape	cytosol	71.54	67.79
KRH03791	Soybean	cytosol	65.81	64.79
KRH56674	Soybean	cytosol	65.81	64.66
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	60.47	63.49
Zm00001d038944_P003	Maize	plastid	60.67	61.28
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	47.43	61.07
TraesCS1D01G390600.1	Wheat	plastid	60.28	61.0
EES18643	Sorghum	plastid	60.28	60.88
GSMUA_AchrUn_...	Banana	cytosol	56.52	60.72
TraesCS1A01G382900.2	Wheat	plastid	59.68	60.64
EES03447	Sorghum	plastid	59.88	60.6
TraesCS1B01G408600.1	Wheat	plastid	59.88	60.6
PGSC0003DMT400067211	Potato	cytosol, plastid	57.91	58.84
GSMUA_Achr8P26100_001	Banana	cytosol	54.94	57.92
HORVU3Hr1G022550.2	Barley	cytosol	43.87	57.51
Os05t0555100-01	Rice	plastid	49.8	56.12
Zm00001d009500_P002	Maize	plastid	55.14	55.8
TraesCS3D01G123500.1	Wheat	plastid	50.2	52.59
TraesCS3A01G121400.1	Wheat	plastid	50.2	52.59
TraesCS3B01G140800.1	Wheat	plastid	50.4	52.47
EES19134	Sorghum	plastid	49.6	51.86
Os01t0178400-01	Rice	cytosol	20.95	51.71
Zm00001d037626_P001	Maize	plastid	49.6	51.65
Zm00001d039625_P001	Maize	mitochondrion, plastid	50.59	51.51
EES00199	Sorghum	cytosol, mitochondrion, plastid	51.19	51.49
Os05t0178400-01	Rice	plasma membrane	49.6	51.12
PGSC0003DMT400045008	Potato	cytosol, plastid	50.4	50.8
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	48.62	50.62
PGSC0003DMT400017950	Potato	plastid	52.37	50.57
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	48.42	50.41
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	48.42	50.41
PGSC0003DMT400052115	Potato	plastid	51.78	50.38
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	48.02	50.0
HORVU1Hr1G084450.3	Barley	plastid	59.88	49.19
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	47.43	48.78
PGSC0003DMT400060086	Potato	cytosol, plastid	45.06	48.0
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	50.2	46.61
PGSC0003DMT400034814	Potato	cytosol	17.19	41.23
PGSC0003DMT400008785	Potato	cytosol	30.63	38.08

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102584164	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M0ZKL1
PFAM:PF01603	EnsemblPlantsGene:PGSC0003DMG400001069	PGSC:PGSC0003DMG400001069	EnsemblPlants:PGSC0003DMT400002753	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF31	SUPFAM:SSF48371	UniParc:UPI0002955B7C	RefSeq:XP_006366869.1	RefSeq:XP_015160581.1
RefSeq:XP_015160582.1	RefSeq:XP_015160583.1	RefSeq:XP_015160584.1	SEG:seg	:	:

Description

Protein phosphatase 2a, regulatory subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400001069]

Coordinates

chr12:+:4904875..4909941

Molecular Weight (calculated)

57712.8 Da

IEP (calculated)

7.668

GRAVY (calculated)

-0.138

Length

506 amino acids

Sequence
(BLAST)

001: MLKQILAKLP RKSSKCDTFD SSGSNSCNNT SNLGNGIQFT NSCTVIANRL NVVKRMSTAI FPASIVSGGE SVAPHVPFKD VSNAEKQSLF VSKLNLCCTI
101: YDFNDPDKDS AEKDLKRQVL LELNEFVASG SARFTESAIA AVCKMCGVNM FRTFPPKYFS ARGESEDEEP MFDPAWCHLQ LVYDLFLSVI GQGSLDAKVA
201: KKYVDHSFIL KLLDLFDSED PRERECLKSI LHRLYGKFMM HRPAIRKAVS NIFYRFAFET ERHNGIAELL EVFGSVISGF ALPLKEEHRL FFSRALLPLH
301: KPKSLGIYHQ QLAYCVVQFI EKEQNLASIV ITRLLRYWPV TSSQKQLMFI SELEEILEMI SIPEFEKIMV PLFRRIGYCL NSSHFQVAER AHFLWNNDNV
401: LNLVMHNRHV IMPIIISALE RNSQNHWNKA VLNLSQNVRK VFSEMDEELV LECQHKLEED NAKSNVAAER RRLTWERLEI AANYEPVTVP SNIPGMVKPP
501: TCLVSC

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.