CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56674	Soybean	cytosol	93.97	93.79
VIT_11s0016g04500.t01	Wine grape	cytosol	72.57	69.85
Solyc12g006920.1.1	Tomato	plastid	65.37	66.4
PGSC0003DMT400002753	Potato	plastid	64.79	65.81
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	60.31	64.32
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	47.67	62.34
KRH05059	Soybean	cytosol, mitochondrion, plastid	58.95	61.59
EES18643	Sorghum	plastid	59.92	61.48
KRH16045	Soybean	cytosol, mitochondrion, plastid	58.75	61.38
KRH52526	Soybean	cytosol	59.14	61.17
KRH61853	Soybean	plastid	58.95	61.09
Zm00001d038944_P003	Maize	plastid	59.53	61.08
TraesCS1D01G390600.1	Wheat	plastid	58.17	59.8
HORVU3Hr1G022550.2	Barley	cytosol	44.75	59.59
GSMUA_AchrUn_...	Banana	cytosol	54.47	59.45
TraesCS1A01G382900.2	Wheat	plastid	57.59	59.44
TraesCS1B01G408600.1	Wheat	plastid	57.78	59.4
EES03447	Sorghum	plastid	57.59	59.2
KRG90768	Soybean	extracellular, mitochondrion	10.7	58.51
GSMUA_Achr8P26100_001	Banana	cytosol	53.7	57.5
Os05t0555100-01	Rice	plastid	48.64	55.68
KRG96039	Soybean	cytosol, plastid	50.0	55.03
KRH67758	Soybean	plastid	50.19	54.89
Zm00001d039625_P001	Maize	mitochondrion, plastid	52.72	54.53
Os01t0178400-01	Rice	cytosol	21.6	54.15
EES00199	Sorghum	cytosol, mitochondrion, plastid	52.53	53.68
KRH19952	Soybean	cytosol	50.39	53.62
Zm00001d009500_P002	Maize	plastid	52.14	53.6
EES19134	Sorghum	plastid	50.19	53.31
Zm00001d037626_P001	Maize	plastid	50.39	53.29
TraesCS3B01G140800.1	Wheat	plastid	50.39	53.29
KRH32554	Soybean	cytosol	50.39	53.29
TraesCS3D01G123500.1	Wheat	plastid	50.0	53.21
TraesCS3A01G121400.1	Wheat	plastid	50.0	53.21
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	50.0	52.88
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	49.81	52.67
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	49.61	52.47
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	49.61	52.47
Os05t0178400-01	Rice	plasma membrane	50.0	52.34
KRG94414	Soybean	plastid	51.17	50.29
KRH57624	Soybean	cytosol, mitochondrion	51.95	50.0
KRH14754	Soybean	cytosol, plastid	51.17	49.07
KRG97478	Soybean	cytosol, plastid	49.22	48.94
KRG94343	Soybean	cytosol, plastid	50.97	48.88
KRH73387	Soybean	cytosol, plastid	50.97	48.79
KRH31415	Soybean	cytosol, plastid	49.22	48.56
KRH35993	Soybean	cytosol	45.72	48.45
HORVU1Hr1G084450.3	Barley	plastid	57.78	48.21
KRH36100	Soybean	plastid	32.49	36.54

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100786778	MapMan:18.4.24.1.2.3	EMBL:ACUP02010361	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_17G120300	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1MUE7	InterPro:IPR011989	ProteinID:KRH03786.1	ProteinID:KRH03787.1	ProteinID:KRH03788.1	ProteinID:KRH03789.1
ProteinID:KRH03790.1	EnsemblPlants:KRH03791	ProteinID:KRH03791	ProteinID:KRH03791.1	PFAM:PF01603	PIRSF:PIRSF028043
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF31	SUPFAM:SSF48371	UniParc:UPI000233E39A	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:9558276..9562317

Molecular Weight (calculated)

57967.1 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.090

Length

514 amino acids

Sequence
(BLAST)

001: MIKQILSKLP KKVPKSDSSD SARSDSSNTT TFGNVFQCTN VGSTISSKLN VVKRVSSVVF PASMSAGVEA VDPCLSFKDV SNTQKQSLFI SKLNLCCKVY
101: DMSDPDKNTT EQDLKRKTLL ELVDYVSSGS VKFTEPAIAA LCKMCATNLF RAFPPKFRTS TTGGETEDEE PIFDPAWSHL QVVYDLLLQF INYNSLDVKL
201: AKAHIDHAFI LRLLDLFDSE DPRERDCLKT ILHRVYGKFM IHRPFIRKSV SNIIYRFVFE TERHNGIAEL LEIFGSVISG FALPLKEEHK IFLLRALVPL
301: HKPKSVGIYH QQLTYCVVQF IDKDQRLASS VIKGLLKYWP VTNSQKELMF ISELEEILEM TSMAEFQKIM VPLFRRMAFC LNSSHYQVAE RAHLLWNNEH
401: ILNLITQNRQ VILPLVFSAI VHNGQSHWNQ AVLNLTQNIR KMLSQMDEEL VAACQRRIEE EDSSASSAAE RRRVTWERLE AAAANCVPVQ STTSVGGAGD
501: VLVPVKSATC SVAC

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.