CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57624	Soybean	cytosol, mitochondrion	96.08	96.44
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	62.87	83.0
KRG94414	Soybean	plastid	80.78	82.79
Solyc02g067980.2.1	Tomato	nucleus	75.0	76.72
PGSC0003DMT400052115	Potato	plastid	73.13	75.38
Solyc02g093800.2.1	Tomato	plastid	72.95	74.76
PGSC0003DMT400017950	Potato	plastid	72.76	74.43
EER93109	Sorghum	cytosol, plastid	68.66	70.91
Os03t0844500-01	Rice	cytosol	67.54	70.02
HORVU2Hr1G083850.1	Barley	cytosol	65.3	70.0
TraesCS2A01G320700.2	Wheat	mitochondrion	65.67	69.98
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	65.67	69.98
TraesCS2D01G341400.3	Wheat	mitochondrion	65.67	69.98
KXG26587	Sorghum	mitochondrion	66.42	69.8
Os04t0485100-01	Rice	plasma membrane	66.23	69.74
Os08t0122000-01	Rice	plasma membrane	66.23	68.8
Zm00001d043447_P001	Maize	cytosol	22.01	68.6
HORVU5Hr1G120550.1	Barley	nucleus, plastid	65.3	68.49
TraesCS7B01G214300.2	Wheat	nucleus	66.04	68.47
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	66.04	68.47
KRH31415	Soybean	cytosol, plastid	66.42	68.33
TraesCS4A01G341600.1	Wheat	plastid	65.11	68.3
TraesCS7A01G313600.1	Wheat	nucleus	65.86	68.28
VIT_14s0219g00010.t01	Wine grape	cytosol	16.42	68.22
TraesCS7D01G310200.1	Wheat	cytosol, plastid	65.67	68.09
KRG97478	Soybean	cytosol, plastid	65.49	67.89
OQU79819	Sorghum	cytosol	66.98	67.86
TraesCS5D01G531300.1	Wheat	plastid	64.93	67.84
TraesCS5B01G533000.1	Wheat	plastid	64.55	67.45
Os07t0274800-02	Rice	extracellular, plasma membrane	64.18	66.54
KRG90768	Soybean	extracellular, mitochondrion	11.38	64.89
OQU88848	Sorghum	cytosol	60.07	63.89
KRH73387	Soybean	cytosol, plastid	63.99	63.87
KRH14754	Soybean	cytosol, plastid	63.62	63.62
KRH67758	Soybean	plastid	54.85	62.55
KRG96039	Soybean	cytosol, plastid	54.48	62.53
HORVU0Hr1G004960.2	Barley	cytosol	57.28	61.77
KRH19952	Soybean	cytosol	55.22	61.28
KRH32554	Soybean	cytosol	55.41	61.11
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	21.83	59.39
KRH05059	Soybean	cytosol, mitochondrion, plastid	50.56	55.08
KRH52526	Soybean	cytosol	50.93	54.93
KRH61853	Soybean	plastid	50.75	54.84
KRH16045	Soybean	cytosol, mitochondrion, plastid	50.19	54.67
KRH35993	Soybean	cytosol	48.13	53.2
KRH56674	Soybean	cytosol	49.44	51.46
KRH03791	Soybean	cytosol	48.88	50.97
KRH36100	Soybean	plastid	31.53	36.98

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100807697	MapMan:18.4.24.1.2.3	EMBL:ACUP02011936	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_19G077700	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1N7G3	InterPro:IPR011989	EnsemblPlants:KRG94343	ProteinID:KRG94343	ProteinID:KRG94343.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000233F2E3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:27957494..27963787

Molecular Weight (calculated)

61476.2 Da

IEP (calculated)

8.264

GRAVY (calculated)

-0.327

Length

536 amino acids

Sequence
(BLAST)

001: MIKQILNRLP RKPSKSGESR EGGAILTPSS TPSTSARSSD AAGYSHGNAT ASPLSGTADS NLVPGLNHGD RIVQAMNSKL NLNGSFPVTA YEALPSFRDV
101: PNSEKQNLFI RKLQMCCVLF DFTDPTKNIK EKEIKRQTLV ELVDYVSTAN GKFTDVMMQE IVKMVSINLF RTFISPPREN KVLEAFDVDE EEPSMDPAWP
201: YLQIVYELLL RFVTSPETDA KLAKRYIDHS FVLRLLDLFD SEDPRERDYL KTVLHRIYGK FMVHRPFIRK AINNIFYRFI FETEKHSGIA ELLEILGSII
301: NGFALPLKEE HKLFLVRALI PLHKPKCIPM YHQQLSYCIS QFVEKDCKLA DTVIRGLLKY WPITNSSKEI MFIGELEEVL EATQPAEFQR CMVPLFRQIS
401: RCLSSSHFQV AERALFLWNN DHIETLIKQN YKIILPVVLP ALEYNARNHW NQAVQSLTIN VRKIFADTDP EFYEEYMIKV RENEAQEKDM KSKREARWKR
501: LEDMGGMKAT TNEAVLVSPR TASHTPSGKA SRAQLE

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.