CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049642_P001	Maize	cytosol, plastid	86.58	91.24
Os08t0122000-01	Rice	plasma membrane	82.04	84.11
TraesCS7B01G214300.2	Wheat	nucleus	81.66	83.56
TraesCS7D01G310200.1	Wheat	cytosol, plastid	81.47	83.37
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	81.29	83.17
TraesCS7A01G313600.1	Wheat	nucleus	80.91	82.79
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	57.09	74.38
CDX98102	Canola	cytosol, plastid	63.33	72.35
Solyc02g067980.2.1	Tomato	nucleus	70.51	71.18
EER93109	Sorghum	cytosol, plastid	69.75	71.1
KXG26587	Sorghum	mitochondrion	68.05	70.59
PGSC0003DMT400017950	Potato	plastid	69.57	70.23
AT1G13460.2	Thale cress	cytosol, plastid	64.65	69.51
PGSC0003DMT400045008	Potato	cytosol, plastid	65.78	69.32
Solyc05g014340.2.1	Tomato	cytosol	65.6	69.12
Solyc02g093800.2.1	Tomato	plastid	68.24	69.02
PGSC0003DMT400052115	Potato	plastid	67.49	68.65
Bra019720.1-P	Field mustard	plastid	63.89	68.56
CDY30030	Canola	plastid	64.27	68.55
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	66.35	68.16
Bra025178.1-P	Field mustard	cytosol, plastid	64.27	68.0
KRH57624	Soybean	cytosol, mitochondrion	68.43	67.79
KRG94414	Soybean	plastid	66.73	67.5
KRG94343	Soybean	cytosol, plastid	67.86	66.98
KRH31415	Soybean	cytosol, plastid	65.6	66.6
CDX83578	Canola	cytosol	60.11	65.98
KRG97478	Soybean	cytosol, plastid	64.46	65.96
Bra036352.1-P	Field mustard	cytosol, plastid	65.22	65.22
VIT_14s0219g00010.t01	Wine grape	cytosol	15.31	62.79
OQU88848	Sorghum	cytosol	59.74	62.7
CDY13605	Canola	cytosol, plastid	59.92	62.28
AT3G26020.4	Thale cress	cytosol, plastid	60.87	60.87
PGSC0003DMT400034814	Potato	cytosol	23.63	59.24
KXG37844	Sorghum	plastid	55.39	55.92
EES03447	Sorghum	plastid	51.23	54.2
EES19134	Sorghum	plastid	48.77	53.31
EES18643	Sorghum	plastid	50.09	52.89
EES00199	Sorghum	cytosol, mitochondrion, plastid	48.58	51.09
CDY50168	Canola	cytosol	14.93	49.07
EER99281	Sorghum	mitochondrion	33.65	37.79

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:8074049	UniProt:A0A1Z5R8B1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989
EnsemblPlants:OQU79819	ProteinID:OQU79819	ProteinID:OQU79819.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF17	EnsemblPlantsGene:SORBI_3007G024700	SUPFAM:SSF48371	UniParc:UPI000B426910	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:2209689..2212412

Molecular Weight (calculated)

60315.1 Da

IEP (calculated)

8.597

GRAVY (calculated)

-0.249

Length

529 amino acids

Sequence
(BLAST)

001: MIKQILGRLP KKEKSAKSGE KELAGAGPSV PSPTSDARTT TDLTMSSRLV NPSNYASAAP NPGQSYGARG AGLGAGGVSN GFAALSAGYE ALPSFRDVPA
101: SEKPGLFLRK LAMCCVVFDF ADPTKDVREK EVKRQTLLEL VDYITSATGK FPEHVVQEVI RMVSVNLFRV PAPAARENKA LESFDMEEEE PVMDPAWPHL
201: QIVYELFLRF IQSPETDAKL AKRYIDHGFI VRLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING
301: FALPLKEEHK LFLVRALIPL HKPKCVAMYH QQLSYCVTQF VEKDCKLADT VIRGLLKYWP ITNSSKEVMF LGELEEVLEA TQPAEFQRCM VQLFRQIARC
401: LSSSHFQKIM FNSWSVFSRL KTTICPMVAE RALFLWNNDH IESLIKQNSK VILPIIFPAL ERNTKGHWNQ AVQSLSLNVR KIFMDHDPTL FEECRKKFEE
501: EEAQEAGVRS KREARWKRLE EIALSKSPQ

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.