Factsheet for Solyc05g014340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045008	Potato	cytosol, plastid	98.41	98.41
CDX98102	Canola	cytosol, plastid	68.92	74.73
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	75.7	73.79
Solyc02g067980.2.1	Tomato	nucleus	75.7	72.52
Bra025178.1-P	Field mustard	cytosol, plastid	71.91	72.2
AT1G13460.2	Thale cress	cytosol, plastid	70.52	71.95
Bra019720.1-P	Field mustard	plastid	69.32	70.59
CDY30030	Canola	plastid	69.72	70.56
Solyc02g093800.2.1	Tomato	plastid	73.11	70.17
CDX83578	Canola	cytosol	67.33	70.12
KRH31415	Soybean	cytosol, plastid	72.31	69.67
KRG97478	Soybean	cytosol, plastid	71.12	69.05
Bra036352.1-P	Field mustard	cytosol, plastid	72.11	68.43
HORVU2Hr1G083850.1	Barley	cytosol	68.13	68.4
Os04t0485100-01	Rice	plasma membrane	69.32	68.37
Zm00001d043447_P001	Maize	cytosol	23.31	68.02
TraesCS2D01G341400.3	Wheat	mitochondrion	68.13	67.99
KXG26587	Sorghum	mitochondrion	68.92	67.84
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	67.73	67.59
TraesCS2A01G320700.2	Wheat	mitochondrion	67.73	67.59
TraesCS4A01G341600.1	Wheat	plastid	68.73	67.51
Os08t0122000-01	Rice	plasma membrane	69.32	67.44
HORVU5Hr1G120550.1	Barley	nucleus, plastid	68.53	67.32
TraesCS5D01G531300.1	Wheat	plastid	68.53	67.06
TraesCS5B01G533000.1	Wheat	plastid	68.53	67.06
EER93109	Sorghum	cytosol, plastid	69.12	66.86
Os03t0844500-01	Rice	cytosol	68.53	66.54
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	68.53	66.54
TraesCS7D01G310200.1	Wheat	cytosol, plastid	68.53	66.54
TraesCS7B01G214300.2	Wheat	nucleus	68.13	66.15
TraesCS7A01G313600.1	Wheat	nucleus	68.13	66.15
CDY13605	Canola	cytosol, plastid	66.53	65.62
OQU79819	Sorghum	cytosol	69.12	65.6
Os07t0274800-02	Rice	extracellular, plasma membrane	67.13	65.18
AT3G26020.4	Thale cress	cytosol, plastid	67.73	64.27
OQU88848	Sorghum	cytosol	63.94	63.69
HORVU0Hr1G004960.2	Barley	cytosol	60.96	61.57
Solyc10g083920.1.1	Tomato	nucleus	57.57	58.74
Solyc09g008400.2.1	Tomato	nucleus	56.97	58.01
Solyc06g065690.2.1	Tomato	cytosol, plastid	54.38	54.82
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.32	51.78
Solyc12g006920.1.1	Tomato	plastid	50.6	50.2
Solyc05g055530.2.1	Tomato	cytosol	19.72	45.83
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	33.47	38.01

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:K4BYF4	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	EnsemblPlantsGene:Solyc05g014340.2
EnsemblPlants:Solyc05g014340.2.1	UniParc:UPI00027664C2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:-:8167788..8176116

Molecular Weight (calculated)

58014.4 Da

IEP (calculated)

8.811

GRAVY (calculated)

-0.300

Length

502 amino acids

Sequence
(BLAST)

001: MIKQIFGKKK QSKTAGSTSS KKSDGGGKKV GVSANTVISA PYSVSASTGD KFVRDGSLKL NGNLVAASYD ALPSFRDVPN AEKQNLFIRK LNMCCVLFDF
101: TDPTKNLKEK EIKRQTLLEL VEYVTSANVK FTEVVMQAVV KMVSTNLFRE LMPQPRENKT LAFDVEEDEP AMDPSWPHLQ IVYEFLLRFV ASPETDAKVA
201: KRYIDHSFVL RLLDLFDSED PREREYLKII LHRVYGKFMV HRPYIRKAIN NIFYRFVFET EKHNGIAELL EILGSIINGF ALPLKEEHKL FLVRTLIPLH
301: KPKCLAMYHQ QLTYCMTQFV EKDCKLADTV IRGLLKYWPV TNSSKEVMFL GELEEILEAT QPPDFQRCMV PLFRRIAQCL TSLHFQVAER ALFLWNNDHI
401: ENLIKQHRKV ILPIIFPALE RNARNHWNQA VHSLSLNIRK IFYDLDPELF KECLHNFQED ELKEDEIKSK REATWKRLEE LAAKNTTSNE AVLVPSTGHS
501: RT

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.