Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008400.2.1 | Tomato | nucleus | 62.04 | 27.18 |
| Solyc10g083920.1.1 | Tomato | nucleus | 61.57 | 27.03 |
| Solyc05g014340.2.1 | Tomato | cytosol | 45.83 | 19.72 |
| Solyc02g067980.2.1 | Tomato | nucleus | 47.69 | 19.66 |
| Solyc02g093800.2.1 | Tomato | plastid | 44.44 | 18.36 |
| Solyc06g065690.2.1 | Tomato | cytosol, plastid | 39.35 | 17.07 |
| Solyc12g006920.1.1 | Tomato | plastid | 37.5 | 16.01 |
| Solyc01g111790.1.1 | Tomato | mitochondrion, plastid | 23.15 | 11.31 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019888 |
| GO:GO:0030234 | GO:GO:0043666 | GO:GO:0050790 | InterPro:IPR011989 | UniProt:K4C2M9 | PFAM:PF01603 |
| InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc05g055530.2 | EnsemblPlants:Solyc05g055530.2.1 |
| UniParc:UPI0002767241 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:65139613..65140338
Molecular Weight (calculated)
24517.7 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.214
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKIIKGRGK KSSKGDAVEP PIPSSLPNVP VDHASRIATS VVASQHVTLA NATPDPSVVE VLPLLKEVAL SERHVLFIRK LQICCVQFDF AETVKCARQK
101: EIKRQTLTEL IDLVQSGSCK MNEIMQEELV RMISTNLFRC LPPASHENTG SEGVEEEDDM YLDPSWPHLQ LVYELLLRYV MSTEMDTKVA KRYLDHSFVL
201: KLLDLFDSED PRERHL
101: EIKRQTLTEL IDLVQSGSCK MNEIMQEELV RMISTNLFRC LPPASHENTG SEGVEEEDDM YLDPSWPHLQ LVYELLLRYV MSTEMDTKVA KRYLDHSFVL
201: KLLDLFDSED PRERHL
001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
Arabidopsis Description
B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.