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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98102 Canola cytosol, plastid 84.96 90.28
CDY30030 Canola plastid 88.01 87.3
Bra019720.1-P Field mustard plastid 87.2 87.02
AT3G26020.4 Thale cress cytosol, plastid 81.3 75.61
Solyc05g014340.2.1 Tomato cytosol 71.95 70.52
PGSC0003DMT400045008 Potato cytosol, plastid 71.95 70.52
KRG97478 Soybean cytosol, plastid 70.94 67.5
VIT_01s0010g02350.t01 Wine grape cytosol, mitochondrion, plastid 70.53 67.38
KRH31415 Soybean cytosol, plastid 71.34 67.37
HORVU2Hr1G083850.1 Barley cytosol 68.09 67.0
TraesCS2B01G362000.2 Wheat cytosol, mitochondrion 68.29 66.8
TraesCS2D01G341400.3 Wheat mitochondrion 68.09 66.6
TraesCS2A01G320700.2 Wheat mitochondrion 68.09 66.6
Os04t0485100-01 Rice plasma membrane 68.7 66.4
TraesCS7D01G310200.1 Wheat cytosol, plastid 69.31 65.96
TraesCS7B01G214300.2 Wheat nucleus 69.31 65.96
HORVU5Hr1G120550.1 Barley nucleus, plastid 68.5 65.95
HORVU7Hr1G074840.1 Barley mitochondrion, plastid 69.11 65.76
TraesCS7A01G313600.1 Wheat nucleus 68.9 65.57
TraesCS4A01G341600.1 Wheat plastid 68.09 65.56
TraesCS5B01G533000.1 Wheat plastid 68.29 65.5
KXG26587 Sorghum mitochondrion 67.89 65.49
TraesCS5D01G531300.1 Wheat plastid 68.09 65.3
Os08t0122000-01 Rice plasma membrane 68.29 65.12
Os03t0844500-01 Rice cytosol 68.29 64.99
OQU79819 Sorghum cytosol 69.51 64.65
EER93109 Sorghum cytosol, plastid 67.89 64.35
Zm00001d043447_P001 Maize cytosol 22.36 63.95
AT4G15415.5 Thale cress cytosol, plastid 65.45 61.69
Os07t0274800-02 Rice extracellular, plasma membrane 64.63 61.51
AT3G26030.1 Thale cress cytosol 59.35 61.22
HORVU0Hr1G004960.2 Barley cytosol 60.16 59.56
OQU88848 Sorghum cytosol 60.77 59.33
AT3G09880.1 Thale cress cytosol, plastid 59.76 58.92
AT3G21650.2 Thale cress nucleus, plastid 65.24 58.79
AT5G03470.1 Thale cress cytosol 57.11 56.77
AT5G25510.1 Thale cress cytosol, mitochondrion, plastid 56.71 55.8
AT3G54930.2 Thale cress cytosol, plastid 54.88 54.33
GSMUA_Achr8P01190_001 Banana cytosol, mitochondrion, nucleus, plastid 19.31 48.22
Protein Annotations
Gene3D:1.25.10.10MapMan:18.4.24.1.2.3EntrezGene:837906ProteinID:AAG09562.1ProteinID:AEE29021.1ProteinID:AEE29022.1
InterPro:ARM-likeInterPro:ARM-type_foldArrayExpress:AT1G13460EnsemblPlantsGene:AT1G13460RefSeq:AT1G13460TAIR:AT1G13460
RefSeq:AT1G13460-TAIR-GEnsemblPlants:AT1G13460.2TAIR:AT1G13460.2EMBL:AY085069Unigene:At.42029EMBL:BT026384
GO:GO:0000159GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0005829GO:GO:0006464GO:GO:0006629
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009719
GO:GO:0009742GO:GO:0009987GO:GO:0019538GO:GO:0019888GO:GO:0030234GO:GO:0032000
GO:GO:0043666GO:GO:0050790GO:GO:1900458InterPro:IPR011989RefSeq:NP_172803.1RefSeq:NP_973816.1
PFAM:PF01603PIRSF:PIRSF028043PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
InterPro:PP2A_B56PANTHER:PTHR10257PANTHER:PTHR10257:SF46UniProt:Q8LF36SUPFAM:SSF48371UniParc:UPI000009FD27
SEG:seg:::::
Description
B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
Coordinates
chr1:+:4615767..4618449
Molecular Weight (calculated)
56512.9 Da
IEP (calculated)
8.541
GRAVY (calculated)
-0.437
Length
492 amino acids
Sequence
(BLAST)
001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.