Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031294.1-P | Field mustard | cytosol, plastid | 84.8 | 90.96 |
| CDY44320 | Canola | cytosol, plastid | 84.62 | 90.94 |
| CDY38628 | Canola | cytosol, mitochondrion | 84.43 | 90.57 |
| AT4G15415.5 | Thale cress | cytosol, plastid | 80.59 | 84.29 |
| VIT_12s0059g01170.t01 | Wine grape | mitochondrion, plastid | 74.18 | 73.91 |
| KRH73387 | Soybean | cytosol, plastid | 70.15 | 71.32 |
| KRH14754 | Soybean | cytosol, plastid | 69.41 | 70.71 |
| PGSC0003DMT400001856 | Potato | cytosol, mitochondrion, plastid | 69.6 | 69.72 |
| GSMUA_Achr9P19120_001 | Banana | mitochondrion, plastid | 56.59 | 66.31 |
| AT1G13460.2 | Thale cress | cytosol, plastid | 58.79 | 65.24 |
| AT3G26030.1 | Thale cress | cytosol | 53.48 | 61.22 |
| AT3G09880.1 | Thale cress | cytosol, plastid | 54.95 | 60.12 |
| AT3G26020.4 | Thale cress | cytosol, plastid | 55.86 | 57.66 |
| AT5G03470.1 | Thale cress | cytosol | 51.47 | 56.77 |
| AT5G25510.1 | Thale cress | cytosol, mitochondrion, plastid | 51.47 | 56.2 |
| AT3G54930.2 | Thale cress | cytosol, plastid | 48.72 | 53.52 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:18.4.24.1.2.3 | EntrezGene:821719 | UniProt:A0A178V736 | ProteinID:AEE76534.1 | EMBL:AK227037 |
| ProteinID:ANM64496.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT3G21650 | EnsemblPlantsGene:AT3G21650 | RefSeq:AT3G21650 |
| TAIR:AT3G21650 | RefSeq:AT3G21650-TAIR-G | EnsemblPlants:AT3G21650.2 | Unigene:At.38020 | ProteinID:BAB02360.1 | GO:GO:0000159 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0019888 | GO:GO:0030234 | GO:GO:0043666 | GO:GO:0045824 | GO:GO:0050790 |
| GO:GO:0080183 | GO:GO:1900458 | InterPro:IPR011989 | RefSeq:NP_001326520.1 | RefSeq:NP_188802.1 | ProteinID:OAP02070.1 |
| PFAM:PF01603 | PIRSF:PIRSF028043 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF27 | UniProt:Q9LVE2 |
| SUPFAM:SSF48371 | UniParc:UPI00001634BC | SEG:seg | : | : | : |
Description
B'ZETAProtein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V736]
Coordinates
chr3:-:7621569..7624114
Molecular Weight (calculated)
61734.2 Da
IEP (calculated)
8.674
GRAVY (calculated)
-0.268
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKQIFGKLP RKPSKSLQND SNGEGGVNNS YYASNSSTTS ISKPSSTSSK SSSASGSRVA NGTLAPNSMS SNRNTNQGKK PLGGDAVVQA GPFPSSGGVY
101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE
201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE
301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC
401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK
501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS
101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE
201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE
301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC
401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK
501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.