CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031294.1-P	Field mustard	cytosol, plastid	99.02	98.82
CDY38628	Canola	cytosol, mitochondrion	99.02	98.82
AT3G21650.2	Thale cress	nucleus, plastid	90.94	84.62
CDY22925	Canola	plastid	77.76	79.96
CDY48287	Canola	plastid	77.56	79.44
CDY09766	Canola	mitochondrion, plastid	71.06	77.63
CDX90593	Canola	cytosol, plastid	70.28	76.94
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	77.95	72.26
KRH73387	Soybean	cytosol, plastid	72.83	68.9
CDX98102	Canola	cytosol, plastid	62.4	68.47
KRH14754	Soybean	cytosol, plastid	71.85	68.1
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	73.03	68.07
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	60.43	65.88
CDY30030	Canola	plastid	62.4	63.91
CDY13606	Canola	cytosol	58.66	62.87
CDX83578	Canola	cytosol	59.65	62.86
CDX83579	Canola	cytosol	58.66	62.74
CDY41574	Canola	cytosol	59.25	61.68
CDY54611	Canola	cytosol	58.86	61.02
CDX73997	Canola	cytosol, plastid	58.07	60.33
CDY07942	Canola	cytosol, plastid	57.87	59.88
CDY13605	Canola	cytosol, plastid	59.45	59.33
CDX87083	Canola	cytosol	40.75	58.81
CDY04885	Canola	cytosol, plastid	53.54	56.43
CDY05497	Canola	mitochondrion, plastid	53.74	56.29
CDY54903	Canola	mitochondrion, plastid	53.54	55.97
CDY44370	Canola	cytosol, plastid	52.76	55.49
CDX88186	Canola	cytosol, plastid	53.35	54.75
CDX80521	Canola	plastid	53.15	54.44
CDY56962	Canola	cytosol, plastid	52.56	54.27
CDX67616	Canola	cytosol	51.38	53.37
CDY07514	Canola	cytosol	50.98	52.97
CDX73425	Canola	cytosol, plastid	52.95	50.09
CDY08231	Canola	mitochondrion	31.89	48.07
CDY50168	Canola	cytosol	14.96	47.2
CDY67412	Canola	mitochondrion	28.35	44.44
CDY04189	Canola	cytosol, golgi, nucleus	19.29	43.17
CDY35507	Canola	golgi	24.8	41.58
CDY40986	Canola	nucleus, plastid	59.45	31.66
CDX99733	Canola	nucleus, plastid	59.84	30.04

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078I0B6	UniProt:A0A078I0B6	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY44320	ProteinID:CDY44320	ProteinID:CDY44320.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00079963001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371	UniParc:UPI0004EE588D
SEG:seg	:	:	:	:	:

Description

BnaC05g30730DBnaC05g30730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0B6]

Coordinates

chrLK032586:+:80132..82419

Molecular Weight (calculated)

58239.3 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.260

Length

508 amino acids

Sequence
(BLAST)

001: MIKQIFGKLP RKPSKSLNND SNGEGAVNSY YAPNPSASGS RLPNGTLAPN SNKNIQAGPF PPSGVVYEAL PSFRDVPISE KPNLFLQKLT MCCVVFDFRD
101: PSKNLKEKEI KRQTLLELVD YVASVGVKFN EAAIQELTKM VAVNLFRTFP SANHETKILE MHDLEDEEPS LEPAWPHIQV VYEILLRFVA SPMTDAKLAK
201: RYIDHSFVLK LLDLFDSEDQ REREYLKTIL HRVYGKFMVH RPYIRKAINN IFYRFISETE KHNGIAELLE ILGSIINGFA LPLKEEHKLF LVRALIPLHK
301: PKCASVYYQQ LSYCIVQFVE KDFKLADCII RGLLKYWPVT NSSKEVMFLG ELEEVLEATQ AAEFQRCMVP LFRQIARCLN SSHFQVAERA LFLWNNDHIR
401: NLITQNHKVI MPIVFPALER NTRGHWNQAV KTLTLNVRKV FSDVDQALFD ECLAKFQVEE ENKTELKANR ERTWKRLEDL AASKTNEAEL VPRFVSSVNL
501: ASSSESSG

Best Arabidopsis Sequence Match ( AT3G21650.2 )
(BLAST)

001: MIKQIFGKLP RKPSKSLQND SNGEGGVNNS YYASNSSTTS ISKPSSTSSK SSSASGSRVA NGTLAPNSMS SNRNTNQGKK PLGGDAVVQA GPFPSSGGVY
101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE
201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE
301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC
401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK
501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS

Arabidopsis Description

B'ZETAProtein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V736]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.