CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67412	Canola	mitochondrion	85.16	88.58
CDY35507	Canola	golgi	79.23	88.12
CDY44370	Canola	cytosol, plastid	68.55	47.83
CDY04885	Canola	cytosol, plastid	68.25	47.72
CDY54611	Canola	cytosol	61.13	42.04
AT5G03470.1	Thale cress	cytosol	61.72	42.02
CDY41574	Canola	cytosol	60.83	42.01
CDY07942	Canola	cytosol, plastid	61.13	41.96
CDX73997	Canola	cytosol, plastid	60.53	41.72
KRH67758	Soybean	plastid	57.86	41.49
KRG96039	Soybean	cytosol, plastid	56.38	40.69
CDX87083	Canola	cytosol	42.43	40.62
KRH19952	Soybean	cytosol	55.79	38.92
KRH32554	Soybean	cytosol	56.08	38.89
Solyc09g008400.2.1	Tomato	nucleus	56.08	38.34
Solyc10g083920.1.1	Tomato	nucleus	54.9	37.6
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	54.6	37.4
VIT_08s0007g04850.t01	Wine grape	cytosol	55.19	37.05
CDX98102	Canola	cytosol, plastid	49.55	36.07
CDY56962	Canola	cytosol, plastid	49.55	33.94
CDY30030	Canola	plastid	49.55	33.67
CDY22925	Canola	plastid	48.66	33.2
CDX67616	Canola	cytosol	48.07	33.13
CDY07514	Canola	cytosol	48.07	33.13
CDY48287	Canola	plastid	48.66	33.06
CDY38628	Canola	cytosol, mitochondrion	48.37	32.02
CDY44320	Canola	cytosol, plastid	48.07	31.89
CDX90593	Canola	cytosol, plastid	43.62	31.68
CDX73425	Canola	cytosol, plastid	50.15	31.47
CDY09766	Canola	mitochondrion, plastid	43.32	31.4
CDX83579	Canola	cytosol	42.73	30.32
CDY13606	Canola	cytosol	42.43	30.17
CDY05497	Canola	mitochondrion, plastid	43.32	30.1
CDY54903	Canola	mitochondrion, plastid	42.73	29.63
CDX83578	Canola	cytosol	42.14	29.46
CDX80521	Canola	plastid	43.03	29.23
CDX88186	Canola	cytosol, plastid	41.84	28.48
CDY13605	Canola	cytosol, plastid	42.14	27.9
CDY04189	Canola	cytosol, golgi, nucleus	10.98	16.3
CDY40986	Canola	nucleus, plastid	42.73	15.09
CDX99733	Canola	nucleus, plastid	43.32	14.43
CDY50168	Canola	cytosol	5.93	12.42

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078F4C3	UniProt:A0A078F4C3	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY08231	ProteinID:CDY08231	ProteinID:CDY08231.1	ncoils:Coil	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00125552001	InterPro:IPR011989
PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI0004EE03C8
SEG:seg	:	:	:	:	:

Description

BnaA05g13880DBnaA05g13880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4C3]

Coordinates

chrLK031984:-:236669..240658

Molecular Weight (calculated)

39254.1 Da

IEP (calculated)

6.741

GRAVY (calculated)

-0.384

Length

337 amino acids

Sequence
(BLAST)

001: MVHRPFIRKG INNIFYRFVY ETERHSGIGE LLEIMGSIIN VFALPMKEEH KLFLIRALIP LHKPKPIGVY HQQLAYCVVQ FVEKDYRLAD TVIRGLLKFW
101: PVTNCTKEVL FLGELEEVLE ATQPVEFQRC TVPLFQRVVR CLNSSHFQVA ERSLFLWNSE HIVVLIAQNR SVILPIIFAS LEKNTESHWN QAVHGLSENI
201: KRMFMEMDPE LFEECQQEYE EKQARSKEVE EQRQNDHFAL FKTKFFNSFD QNSRGFLSVN PAQPATSIGT QDSSTSGVTN VDELNRVELR SYQLIRIEEP
301: EEDIDPDYMH YLRAIGAYDS VQPQSARGKG RGRKGRR

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.