Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54611 | Canola | cytosol | 97.95 | 97.55 |
| CDX73997 | Canola | cytosol, plastid | 92.42 | 92.23 |
| CDY07942 | Canola | cytosol, plastid | 92.01 | 91.45 |
| AT3G09880.1 | Thale cress | cytosol, plastid | 93.03 | 90.98 |
| KRH67758 | Soybean | plastid | 76.84 | 79.79 |
| KRG96039 | Soybean | cytosol, plastid | 75.82 | 79.23 |
| CDY04885 | Canola | cytosol, plastid | 76.64 | 77.59 |
| KRH19952 | Soybean | cytosol | 76.64 | 77.43 |
| KRH32554 | Soybean | cytosol | 76.43 | 76.75 |
| CDY44370 | Canola | cytosol, plastid | 75.61 | 76.4 |
| Solyc10g083920.1.1 | Tomato | nucleus | 74.8 | 74.19 |
| PGSC0003DMT400072691 | Potato | cytosol, mitochondrion | 74.39 | 73.78 |
| VIT_08s0007g04850.t01 | Wine grape | cytosol | 75.82 | 73.71 |
| Solyc09g008400.2.1 | Tomato | nucleus | 73.57 | 72.82 |
| CDX98102 | Canola | cytosol, plastid | 60.25 | 63.5 |
| CDX67616 | Canola | cytosol | 62.09 | 61.96 |
| CDY56962 | Canola | cytosol, plastid | 62.3 | 61.79 |
| CDY07514 | Canola | cytosol | 61.89 | 61.76 |
| CDY08231 | Canola | mitochondrion | 42.01 | 60.83 |
| CDY09766 | Canola | mitochondrion, plastid | 57.17 | 60.0 |
| CDY22925 | Canola | plastid | 60.66 | 59.92 |
| CDY48287 | Canola | plastid | 60.86 | 59.88 |
| CDX90593 | Canola | cytosol, plastid | 56.76 | 59.7 |
| CDY38628 | Canola | cytosol, mitochondrion | 62.09 | 59.53 |
| CDY30030 | Canola | plastid | 60.45 | 59.48 |
| CDY44320 | Canola | cytosol, plastid | 61.68 | 59.25 |
| CDX83578 | Canola | cytosol | 57.58 | 58.3 |
| CDY13606 | Canola | cytosol | 55.94 | 57.59 |
| CDX83579 | Canola | cytosol | 55.74 | 57.26 |
| CDX87083 | Canola | cytosol | 41.19 | 57.1 |
| CDY67412 | Canola | mitochondrion | 37.91 | 57.1 |
| CDX73425 | Canola | cytosol, plastid | 62.5 | 56.8 |
| CDY35507 | Canola | golgi | 34.22 | 55.12 |
| CDY13605 | Canola | cytosol, plastid | 57.38 | 55.01 |
| CDY05497 | Canola | mitochondrion, plastid | 52.46 | 52.78 |
| CDY54903 | Canola | mitochondrion, plastid | 52.46 | 52.67 |
| CDX80521 | Canola | plastid | 51.84 | 51.01 |
| CDX88186 | Canola | cytosol, plastid | 51.64 | 50.91 |
| CDY50168 | Canola | cytosol | 13.93 | 42.24 |
| CDY04189 | Canola | cytosol, golgi, nucleus | 17.21 | 37.0 |
| CDY40986 | Canola | nucleus, plastid | 56.35 | 28.83 |
| CDX99733 | Canola | nucleus, plastid | 56.35 | 27.17 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:18.4.24.1.2.3 | GO:A0A078HW28 | UniProt:A0A078HW28 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY41574 | ProteinID:CDY41574 | ProteinID:CDY41574.1 | ncoils:Coil | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008601 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019888 | GO:GO:0030234 | GO:GO:0043666 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00073216001 | InterPro:IPR011989 |
| PFAM:PF01603 | PIRSF:PIRSF028043 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 |
| UniParc:UPI0004EB7D5E | SEG:seg | : | : | : | : |
Description
BnaC05g43110DBnaC05g43110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW28]
Coordinates
chrLK032501:+:25239..27992
Molecular Weight (calculated)
56413.3 Da
IEP (calculated)
7.234
GRAVY (calculated)
-0.335
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKKIMKGGH KKPSKSESNE PSSYGLGGSN VVVSHASRGA LVPSSPVTTA PPPPITSVTP LPLFRDVPVS ERQSLFLRKL QNCCFHFDFT DTTKNAREKE
101: IKRQTLLELV DFIQSGASKV ISESCQEEMI KMVSLNLFRC LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV AKRYIDHSFV
201: LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHGGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL HKPKPIAIYH
301: QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCTKENLF LQELEEVLEA TQPVEFQRCM VPLFQQIARC LNSSHFQVAE RALFLWNNEH IVGLIAQNRS
401: VILPIIYPAL EKNIQSHWNQ AVHGLTANIK KMFMEMDPKL FEECRRQYEE KQAKSKEVEE QRQFTWKRLA EAAAERDGVG GEDYMITS
101: IKRQTLLELV DFIQSGASKV ISESCQEEMI KMVSLNLFRC LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV AKRYIDHSFV
201: LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHGGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL HKPKPIAIYH
301: QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCTKENLF LQELEEVLEA TQPVEFQRCM VPLFQQIARC LNSSHFQVAE RALFLWNNEH IVGLIAQNRS
401: VILPIIYPAL EKNIQSHWNQ AVHGLTANIK KMFMEMDPKL FEECRRQYEE KQAKSKEVEE QRQFTWKRLA EAAAERDGVG GEDYMITS
001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS
Arabidopsis Description
B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.