CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031294.1-P	Field mustard	cytosol, plastid	99.41	99.41
CDY44320	Canola	cytosol, plastid	98.82	99.02
AT3G21650.2	Thale cress	nucleus, plastid	90.57	84.43
CDY22925	Canola	plastid	77.6	79.96
CDY48287	Canola	plastid	77.6	79.64
CDY09766	Canola	mitochondrion, plastid	71.12	77.85
CDX90593	Canola	cytosol, plastid	70.33	77.16
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	77.6	72.08
KRH73387	Soybean	cytosol, plastid	72.5	68.72
CDX98102	Canola	cytosol, plastid	62.28	68.47
KRH14754	Soybean	cytosol, plastid	71.71	68.1
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	72.5	67.71
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	60.12	65.67
CDY30030	Canola	plastid	62.28	63.91
CDY13606	Canola	cytosol	58.35	62.66
CDX83578	Canola	cytosol	59.33	62.66
CDX83579	Canola	cytosol	58.35	62.53
CDY41574	Canola	cytosol	59.53	62.09
CDY54611	Canola	cytosol	59.14	61.43
CDX73997	Canola	cytosol, plastid	58.35	60.74
CDY07942	Canola	cytosol, plastid	58.15	60.29
CDY13605	Canola	cytosol, plastid	59.14	59.14
CDX87083	Canola	cytosol	40.86	59.09
CDY04885	Canola	cytosol, plastid	53.63	56.64
CDY05497	Canola	mitochondrion, plastid	53.83	56.49
CDY54903	Canola	mitochondrion, plastid	53.63	56.17
CDY44370	Canola	cytosol, plastid	52.85	55.69
CDX88186	Canola	cytosol, plastid	53.44	54.95
CDX80521	Canola	plastid	53.24	54.64
CDY56962	Canola	cytosol, plastid	52.06	53.86
CDX67616	Canola	cytosol	51.08	53.17
CDY07514	Canola	cytosol	50.69	52.76
CDX73425	Canola	cytosol, plastid	52.46	49.72
CDY08231	Canola	mitochondrion	32.02	48.37
CDY50168	Canola	cytosol	14.73	46.58
CDY67412	Canola	mitochondrion	28.49	44.75
CDY04189	Canola	cytosol, golgi, nucleus	19.25	43.17
CDY35507	Canola	golgi	24.95	41.91
CDY40986	Canola	nucleus, plastid	59.14	31.55
CDX99733	Canola	nucleus, plastid	59.53	29.94

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078HPC8	UniProt:A0A078HPC8	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY38628	ProteinID:CDY38628	ProteinID:CDY38628.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00066325001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371	UniParc:UPI0004EE226E
SEG:seg	:	:	:	:	:

Description

BnaA05g19590DSerine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A078HPC8]

Coordinates

chrLK032428:-:127725..130071

Molecular Weight (calculated)

58329.4 Da

IEP (calculated)

8.022

GRAVY (calculated)

-0.253

Length

509 amino acids

Sequence
(BLAST)

001: MIKQIFGKLP RKPSKSLNND SNGEGAVNSY YAPNPSASAS RLPNGTIAPN SNKNIQAGPF PPSGVAVYEA LPSFRDVPIS EKPNLFLQKL TMCCVVFDFR
101: DPSKNLKEKE IKRQTLLELV DYVASVGVKF NEAAIQELTK MVAVNLFRTF PSANHETKIL EMHDMEDEEP SLEPAWPHIQ VVYEILLRFV ASPMTDAKLA
201: KRYIDHSFVL KLLDLFDSED QREREYLKTI LHRVYGKFMV HRPYIRKAIN NIFYRFISET EKHNGIAELL EILGSIINGF ALPLKEEHKL FLVRALIPLH
301: KPKCASVYYQ QLSYCIVQFV EKDFKLADCI IRGLLKYWPV TNSSKEVMFL GELEEVLEAT QAAEFQRCMV PLFRQIARCL NSSHFQVAER ALFLWNNDHI
401: RNLITQNHKV IMPIVFPALE RNTRGHWNQA VKTLTLNVRK VFSDVDQALF DECLAKFQVE EENKTEVKAN RERTWKRLED LAASKTDEAE LVPRFVSSVN
501: LASSSESSG

Best Arabidopsis Sequence Match ( AT3G21650.2 )
(BLAST)

001: MIKQIFGKLP RKPSKSLQND SNGEGGVNNS YYASNSSTTS ISKPSSTSSK SSSASGSRVA NGTLAPNSMS SNRNTNQGKK PLGGDAVVQA GPFPSSGGVY
101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE
201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE
301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC
401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK
501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS

Arabidopsis Description

B'ZETAProtein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V736]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.