CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04885	Canola	cytosol, plastid	97.93	98.13
AT5G03470.1	Thale cress	cytosol	80.95	78.99
CDY07942	Canola	cytosol, plastid	77.02	75.76
CDY41574	Canola	cytosol	76.4	75.61
CDY54611	Canola	cytosol	76.6	75.51
CDX73997	Canola	cytosol, plastid	76.4	75.46
KRH67758	Soybean	plastid	68.53	70.43
KRG96039	Soybean	cytosol, plastid	67.91	70.24
KRH19952	Soybean	cytosol	68.94	68.94
KRH32554	Soybean	cytosol	69.36	68.93
CDY08231	Canola	mitochondrion	47.83	68.55
VIT_08s0007g04850.t01	Wine grape	cytosol	68.74	66.14
Solyc10g083920.1.1	Tomato	nucleus	67.08	65.85
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	66.67	65.45
Solyc09g008400.2.1	Tomato	nucleus	66.67	65.31
CDY67412	Canola	mitochondrion	42.03	62.65
CDY35507	Canola	golgi	37.68	60.07
CDX98102	Canola	cytosol, plastid	57.14	59.61
CDY56962	Canola	cytosol, plastid	59.01	57.93
CDX67616	Canola	cytosol	57.56	56.85
CDY07514	Canola	cytosol	57.14	56.44
CDY30030	Canola	plastid	57.56	56.05
CDX87083	Canola	cytosol	39.75	54.55
CDY48287	Canola	plastid	55.49	54.03
CDY09766	Canola	mitochondrion, plastid	51.55	53.55
CDX90593	Canola	cytosol, plastid	51.35	53.45
CDY22925	Canola	plastid	54.66	53.44
CDX83578	Canola	cytosol	53.21	53.32
CDX73425	Canola	cytosol, plastid	58.8	52.89
CDY38628	Canola	cytosol, mitochondrion	55.69	52.85
CDY44320	Canola	cytosol, plastid	55.49	52.76
CDY13606	Canola	cytosol	50.93	51.9
CDX83579	Canola	cytosol	50.93	51.79
CDY13605	Canola	cytosol, plastid	53.21	50.49
CDY05497	Canola	mitochondrion, plastid	49.28	49.07
CDY54903	Canola	mitochondrion, plastid	48.86	48.56
CDX80521	Canola	plastid	49.48	48.19
CDX88186	Canola	cytosol, plastid	48.65	47.47
CDY50168	Canola	cytosol	12.42	37.27
CDY04189	Canola	cytosol, golgi, nucleus	14.08	29.96
CDY40986	Canola	nucleus, plastid	51.14	25.89
CDX99733	Canola	nucleus, plastid	51.35	24.51

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078I0F3	UniProt:A0A078I0F3	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY44370	ProteinID:CDY44370	ProteinID:CDY44370.1	ncoils:Coil	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00080035001	InterPro:IPR011989
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371
UniParc:UPI0004EE6A5D	SEG:seg	:	:	:	:

Description

BnaC02g03070DBnaC02g03070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0F3]

Coordinates

chrLK032587:+:170262..172213

Molecular Weight (calculated)

56333.0 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.415

Length

483 amino acids

Sequence
(BLAST)

001: MFKKMMKSGS RKPSRNDAGF DPNSTNMVVN HASRPSPLPP PSPTTTKQPP PMNSIEPLPL LRDLPPPERQ PLFLRKLQIC SFNFDFTDSS KNAREKEIKR
101: QTLLELVDYI QSGTTAKIIS ELCQEEMVKM ISSNIFRSLP ASAGQQPADA EEDEPYLDPN WPHLQLVYEL LIRYVVPSDT DTKIAKRFID HSFVSNLLEL
201: FETEDPRERD YLKTILHRIY GKFMVHRPFI RKGINNIFYR FVYETERHSG IGELLEIMGS IINGFALPMK EEHKLFLIRA LIPLHKPKPI GVYHQQLAYC
301: VVQFVEKDYR LADTVIRGLL KFWPVTNCTK EVLFLGELEE VLEATQPVEF QRCMVPLFQR VARCLNSSHF QVAERSLFLW NSEHIVVLIA QNRSVILPII
401: FASLEKNTES HWNLAVHGLS ENIKRMFMEM DPELFEECQQ EYEEKQSKSK EVEEQRQSRW RRLDEAVEER ERVVGEEDHM IIS

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.