CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034814	Potato	cytosol	29.81	22.75
CDX98102	Canola	cytosol, plastid	58.39	20.3
CDY30030	Canola	plastid	58.39	18.95
CDX83578	Canola	cytosol	51.55	17.22
EER93109	Sorghum	cytosol, plastid	52.8	16.38
CDY13605	Canola	cytosol, plastid	50.93	16.11
TraesCS4A01G341600.1	Wheat	plastid	50.93	16.05
HORVU5Hr1G120550.1	Barley	nucleus, plastid	50.93	16.05
CDY13606	Canola	cytosol	47.2	16.03
CDX83579	Canola	cytosol	47.2	16.0
TraesCS5B01G533000.1	Wheat	plastid	50.93	15.98
TraesCS5D01G531300.1	Wheat	plastid	50.93	15.98
TraesCS7D01G310200.1	Wheat	cytosol, plastid	50.93	15.86
Os03t0844500-01	Rice	cytosol	50.93	15.86
TraesCS7A01G313600.1	Wheat	nucleus	50.31	15.67
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	50.31	15.67
TraesCS7B01G214300.2	Wheat	nucleus	50.31	15.67
Os08t0122000-01	Rice	plasma membrane	49.69	15.5
HORVU2Hr1G083850.1	Barley	cytosol	47.83	15.4
Os04t0485100-01	Rice	plasma membrane	48.45	15.32
TraesCS2D01G341400.3	Wheat	mitochondrion	47.83	15.31
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	47.83	15.31
TraesCS2A01G320700.2	Wheat	mitochondrion	47.83	15.31
KXG26587	Sorghum	mitochondrion	48.45	15.29
CDY44320	Canola	cytosol, plastid	47.2	14.96
OQU79819	Sorghum	cytosol	49.07	14.93
Os07t0274800-02	Rice	extracellular, plasma membrane	47.83	14.89
CDY38628	Canola	cytosol, mitochondrion	46.58	14.73
HORVU0Hr1G004960.2	Barley	cytosol	43.48	14.08
CDY09766	Canola	mitochondrion, plastid	40.37	13.98
CDY41574	Canola	cytosol	42.24	13.93
CDY54611	Canola	cytosol	42.24	13.88
CDX90593	Canola	cytosol, plastid	39.75	13.79
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	16.77	13.71
CDX73997	Canola	cytosol, plastid	41.61	13.7
CDY07942	Canola	cytosol, plastid	41.61	13.65
CDY22925	Canola	plastid	41.61	13.56
CDY48287	Canola	plastid	41.61	13.51
OQU88848	Sorghum	cytosol	42.24	13.49
CDY04885	Canola	cytosol, plastid	39.13	13.07
CDX88186	Canola	cytosol, plastid	39.75	12.93
CDX80521	Canola	plastid	39.75	12.9
CDX67616	Canola	cytosol	38.51	12.68
CDY07514	Canola	cytosol	38.51	12.68
CDY56962	Canola	cytosol, plastid	38.51	12.6
CDY44370	Canola	cytosol, plastid	37.27	12.42
CDY05497	Canola	mitochondrion, plastid	37.27	12.37
CDY54903	Canola	mitochondrion, plastid	37.27	12.35
CDX73425	Canola	cytosol, plastid	38.51	11.55
Zm00001d043447_P001	Maize	cytosol	11.8	11.05
CDX87083	Canola	cytosol	20.5	9.38
CDY40986	Canola	nucleus, plastid	47.83	8.07
CDX99733	Canola	nucleus, plastid	47.83	7.61
CDY04189	Canola	cytosol, golgi, nucleus	9.32	6.61
CDY08231	Canola	mitochondrion	12.42	5.93
CDY67412	Canola	mitochondrion	11.8	5.86
CDY35507	Canola	golgi	9.32	4.95

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078IMA6	UniProt:A0A078IMA6	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY50168	ProteinID:CDY50168	ProteinID:CDY50168.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0008601	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSBRNA2T00096085001	InterPro:IPR011989	PFAM:PF01603
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0004EBEACB	:

Description

BnaC08g15910DBnaC08g15910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMA6]

Coordinates

chrLK032886:-:20356..21157

Molecular Weight (calculated)

18329.3 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.137

Length

161 amino acids

Sequence
(BLAST)

001: MTLAQTCSRD GQGHLGLYCP LFDFSDPTKN VKEKEIKRQT LLEVVDYVAT ANTKFSENAI QEAVRMVSAN VFRTLNPQPR ENKVINDLNL EVEEHSMDPT
101: SFKKLIASPE TEKKLIVYVL PFLLHPSKII IQTSSGLFII QSLHEILELY IGTCMKLNYI K

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.