Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05497 | Canola | mitochondrion, plastid | 86.08 | 62.47 |
| CDY54903 | Canola | mitochondrion, plastid | 86.08 | 62.35 |
| CDX88186 | Canola | cytosol, plastid | 84.94 | 60.4 |
| CDX80521 | Canola | plastid | 84.94 | 60.28 |
| AT5G25510.1 | Thale cress | cytosol, mitochondrion, plastid | 85.23 | 60.0 |
| HORVU3Hr1G022550.2 | Barley | cytosol | 59.66 | 54.4 |
| VIT_04s0008g04270.t01 | Wine grape | mitochondrion | 72.73 | 52.03 |
| KRH52526 | Soybean | cytosol | 72.16 | 51.11 |
| KRH61853 | Soybean | plastid | 71.88 | 51.01 |
| KRH16045 | Soybean | cytosol, mitochondrion, plastid | 71.02 | 50.81 |
| GSMUA_Achr6P34510_001 | Banana | cytosol, plastid | 56.25 | 50.38 |
| Os01t0178400-01 | Rice | cytosol | 29.26 | 50.24 |
| KRH05059 | Soybean | cytosol, mitochondrion, plastid | 70.17 | 50.2 |
| PGSC0003DMT400067211 | Potato | cytosol, plastid | 69.32 | 49.0 |
| Solyc06g065690.2.1 | Tomato | cytosol, plastid | 69.03 | 48.8 |
| TraesCS1A01G382900.2 | Wheat | plastid | 68.75 | 48.59 |
| TraesCS1D01G390600.1 | Wheat | plastid | 68.47 | 48.2 |
| TraesCS1B01G408600.1 | Wheat | plastid | 68.47 | 48.2 |
| EES03447 | Sorghum | plastid | 68.18 | 48.0 |
| GSMUA_Achr2P08330_001 | Banana | cytosol, mitochondrion | 65.62 | 47.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.07 | 47.13 |
| Zm00001d038944_P003 | Maize | plastid | 66.48 | 46.71 |
| EES18643 | Sorghum | plastid | 65.91 | 46.31 |
| EES19134 | Sorghum | plastid | 62.78 | 45.66 |
| CDX98102 | Canola | cytosol, plastid | 59.94 | 45.57 |
| Os05t0178400-01 | Rice | plasma membrane | 63.35 | 45.42 |
| GSMUA_Achr8P26100_001 | Banana | cytosol | 61.93 | 45.42 |
| Zm00001d037626_P001 | Maize | plastid | 62.22 | 45.06 |
| TraesCS1A01G118300.2 | Wheat | cytosol, mitochondrion | 61.93 | 44.86 |
| TraesCS1D01G119400.1 | Wheat | cytosol, mitochondrion | 61.93 | 44.86 |
| TraesCS1B01G138000.1 | Wheat | cytosol, mitochondrion | 61.65 | 44.65 |
| HORVU1Hr1G025690.4 | Barley | cytosol, mitochondrion | 61.65 | 44.65 |
| TraesCS3A01G121400.1 | Wheat | plastid | 59.94 | 43.69 |
| TraesCS3D01G123500.1 | Wheat | plastid | 59.66 | 43.48 |
| Zm00001d039625_P001 | Maize | mitochondrion, plastid | 61.36 | 43.46 |
| TraesCS3B01G140800.1 | Wheat | plastid | 59.66 | 43.21 |
| CDX90593 | Canola | cytosol, plastid | 56.53 | 42.89 |
| EES00199 | Sorghum | cytosol, mitochondrion, plastid | 61.08 | 42.74 |
| CDY22925 | Canola | plastid | 59.94 | 42.71 |
| CDY48287 | Canola | plastid | 59.94 | 42.54 |
| CDY30030 | Canola | plastid | 59.94 | 42.54 |
| CDY08231 | Canola | mitochondrion | 40.62 | 42.43 |
| Zm00001d009500_P002 | Maize | plastid | 59.94 | 42.2 |
| CDY09766 | Canola | mitochondrion, plastid | 55.68 | 42.15 |
| CDX83579 | Canola | cytosol | 55.68 | 41.26 |
| CDY54611 | Canola | cytosol | 57.39 | 41.22 |
| CDY41574 | Canola | cytosol | 57.1 | 41.19 |
| CDY13606 | Canola | cytosol | 55.4 | 41.14 |
| CDY38628 | Canola | cytosol, mitochondrion | 59.09 | 40.86 |
| CDY44320 | Canola | cytosol, plastid | 58.81 | 40.75 |
| CDX73997 | Canola | cytosol, plastid | 55.97 | 40.29 |
| CDY07942 | Canola | cytosol, plastid | 55.97 | 40.12 |
| CDY04885 | Canola | cytosol, plastid | 54.55 | 39.83 |
| CDY44370 | Canola | cytosol, plastid | 54.55 | 39.75 |
| Os05t0555100-01 | Rice | plastid | 50.28 | 39.42 |
| CDX83578 | Canola | cytosol | 53.98 | 39.42 |
| CDY67412 | Canola | mitochondrion | 36.08 | 39.2 |
| HORVU1Hr1G084450.3 | Barley | plastid | 68.47 | 39.12 |
| CDY56962 | Canola | cytosol, plastid | 53.41 | 38.21 |
| CDY35507 | Canola | golgi | 32.1 | 37.29 |
| CDX67616 | Canola | cytosol | 51.7 | 37.22 |
| CDY13605 | Canola | cytosol, plastid | 53.69 | 37.13 |
| CDY07514 | Canola | cytosol | 51.14 | 36.81 |
| CDX73425 | Canola | cytosol, plastid | 53.41 | 35.01 |
| CDY04189 | Canola | cytosol, golgi, nucleus | 21.02 | 32.6 |
| CDY50168 | Canola | cytosol | 9.38 | 20.5 |
| CDY40986 | Canola | nucleus, plastid | 53.69 | 19.81 |
| CDX99733 | Canola | nucleus, plastid | 54.26 | 18.87 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:18.4.24.1.2.3 | GO:A0A078DIH8 | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDX87083 |
| ProteinID:CDX87083 | ProteinID:CDX87083.1 | GO:GO:0000159 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008601 |
| GO:GO:0009987 | GO:GO:0019888 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00145979001 | InterPro:IPR011989 | PFAM:PF01603 |
| PIRSF:PIRSF028043 | InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF13 | SUPFAM:SSF48371 | UniParc:UPI0004EED249 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g03980D
Coordinates
chrLK031849:+:351723..352857
Molecular Weight (calculated)
40933.1 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.065
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRMCAVNLF RVFPPSYREN DDDDNEPVFD PAWPHLQIVY DLLHKFITSP CLDAKISKKY LNHGFILRLL DLFDSEDPRE RECLKTVLHR LYGKFMVHRP
101: FIRKSMSNIF YRFVFETEKH GGIAELLEVF GSIVSGFALP LKEEHKMFLW RVLIPLHKAK SLGSYFQQLT YCVAQYVDKE PKLGSVVVKG LLKFWPVTNS
201: QKEVMFIGEV EEVVEGMSVV EFRKVMVPLF LRVACCVNSC HFQVSERALF LWNNDQIVNL VAHNREAILP IMFAALEKNA ENHWNQSVLN LTLNVRKMLC
301: EMDEDLFMSC HARFQEEEAK QCSVIEKRKE KWARLESAAS MKPVTGKTAV LV
101: FIRKSMSNIF YRFVFETEKH GGIAELLEVF GSIVSGFALP LKEEHKMFLW RVLIPLHKAK SLGSYFQQLT YCVAQYVDKE PKLGSVVVKG LLKFWPVTNS
201: QKEVMFIGEV EEVVEGMSVV EFRKVMVPLF LRVACCVNSC HFQVSERALF LWNNDQIVNL VAHNREAILP IMFAALEKNA ENHWNQSVLN LTLNVRKMLC
301: EMDEDLFMSC HARFQEEEAK QCSVIEKRKE KWARLESAAS MKPVTGKTAV LV
001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC
Arabidopsis Description
B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.