CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037626_P001	Maize	plastid	96.9	96.5
Os05t0178400-01	Rice	plasma membrane	88.64	87.37
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	85.74	85.39
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	85.12	84.77
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	84.71	84.36
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	83.88	83.54
EES00199	Sorghum	cytosol, mitochondrion, plastid	80.37	77.34
CDX87083	Canola	cytosol	45.66	62.78
EES03447	Sorghum	plastid	58.06	56.2
VIT_04s0008g04270.t01	Wine grape	mitochondrion	56.61	55.69
EES18643	Sorghum	plastid	57.44	55.49
KRH61853	Soybean	plastid	56.41	55.04
KRH52526	Soybean	cytosol	56.41	54.93
CDY05497	Canola	mitochondrion, plastid	54.75	54.64
CDY54903	Canola	mitochondrion, plastid	54.75	54.53
KRH05059	Soybean	cytosol, mitochondrion, plastid	55.37	54.47
KRH16045	Soybean	cytosol, mitochondrion, plastid	55.37	54.47
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	56.2	54.4
VIT_11s0016g04500.t01	Wine grape	cytosol	59.71	54.12
Bra020504.1-P	Field mustard	mitochondrion, plastid	54.34	54.0
Bra009846.1-P	Field mustard	plastid	54.75	53.54
CDX80521	Canola	plastid	54.55	53.23
CDX88186	Canola	cytosol, plastid	54.34	53.13
PGSC0003DMT400067211	Potato	cytosol, plastid	54.13	52.61
Solyc06g065690.2.1	Tomato	cytosol, plastid	54.13	52.61
KRH56674	Soybean	cytosol	53.93	50.68
KXG26587	Sorghum	mitochondrion	52.89	50.2
KRH03791	Soybean	cytosol	53.31	50.19
Solyc12g006920.1.1	Tomato	plastid	52.07	49.8
PGSC0003DMT400002753	Potato	plastid	51.86	49.6
OQU79819	Sorghum	cytosol	53.31	48.77
KXG37844	Sorghum	plastid	52.48	48.47
EER93109	Sorghum	cytosol, plastid	50.83	47.4
OQU88848	Sorghum	cytosol	48.55	46.63
EER99281	Sorghum	mitochondrion	34.92	35.88

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	EntrezGene:8072718	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5Z168
EnsemblPlants:EES19134	ProteinID:EES19134	ProteinID:EES19134.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF16	EnsemblPlantsGene:SORBI_3009G064900	SUPFAM:SSF48371	unigene:Sbi.2503	UniParc:UPI0001A88DE9
RefSeq:XP_002440704.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:6895839..6900431

Molecular Weight (calculated)

55021.6 Da

IEP (calculated)

8.157

GRAVY (calculated)

-0.151

Length

484 amino acids

Sequence
(BLAST)

001: MWKQFLGKIS RKSPKSSGAG GGGSPPAKSP SSRGAANGAE AELSASSPAA FPAPSGAETR EDVFLRKLNV CCVVFDFAAE RGRDSPEVER KRQVLVSLVD
101: CVSAAEEPLT EAMLSACVRM FAINLFRVFP PKLRSGASAA ADEDEPFFDP SWYHLQVVYE LLLRFVMSPV VDVKVARKYM DNSFISRLLD LFDSDDPRER
201: ECLKTVLHRI YGKFMGNRPF IRKAVSNIFY RFVFETDHHN GIAELLEVFG SVISGFAKPL KEEHKLFLWK ALIPLHKPKT VGVYLPQLTY CITQFIEKEP
301: KLTGTVIRGL LKYWPVTNSQ KEMMFLGELE EVLELTEMAD FQKCVVPLFR RIAQCLNSSH FQVAERALFL WNNEHLFDLI SQNRQVILPI IYPALERNAR
401: WHWNQSVLNV TMNVRKMFLD MDERLLLACQ TNFQEEEKKR AASEERRRLV WEHLERNAAF HPVTGDIGFA VPPTSAPLVA PTMT

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.