Factsheet for PGSC0003DMT400067211

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065690.2.1	Tomato	cytosol, plastid	98.19	98.19
VIT_04s0008g04270.t01	Wine grape	mitochondrion	71.89	72.76
KRH61853	Soybean	plastid	70.88	71.17
KRH52526	Soybean	cytosol	70.48	70.62
KRH16045	Soybean	cytosol, mitochondrion, plastid	69.68	70.53
KRH05059	Soybean	cytosol, mitochondrion, plastid	69.08	69.92
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	69.88	69.6
CDX87083	Canola	cytosol	49.0	69.32
CDY54903	Canola	mitochondrion, plastid	66.27	67.9
CDY05497	Canola	mitochondrion, plastid	65.66	67.42
Bra020504.1-P	Field mustard	mitochondrion, plastid	65.86	67.35
CDX80521	Canola	plastid	66.67	66.94
Bra009846.1-P	Field mustard	plastid	66.27	66.67
CDX88186	Canola	cytosol, plastid	66.27	66.67
EES18643	Sorghum	plastid	64.06	63.67
Zm00001d038944_P003	Maize	plastid	62.85	62.48
EES03447	Sorghum	plastid	62.65	62.4
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	59.84	61.83
TraesCS1A01G382900.2	Wheat	plastid	61.45	61.45
TraesCS1D01G390600.1	Wheat	plastid	61.65	61.4
TraesCS1B01G408600.1	Wheat	plastid	61.65	61.4
GSMUA_AchrUn_...	Banana	cytosol	56.43	59.66
HORVU3Hr1G022550.2	Barley	cytosol	45.98	59.33
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	46.39	58.78
PGSC0003DMT400002753	Potato	plastid	58.84	57.91
Zm00001d009500_P002	Maize	plastid	57.63	57.4
GSMUA_Achr8P26100_001	Banana	cytosol	54.22	56.25
Os05t0555100-01	Rice	plastid	49.8	55.23
Os01t0178400-01	Rice	cytosol	22.69	55.12
TraesCS3D01G123500.1	Wheat	plastid	53.01	54.66
TraesCS3A01G121400.1	Wheat	plastid	53.01	54.66
TraesCS3B01G140800.1	Wheat	plastid	53.21	54.53
PGSC0003DMT400045008	Potato	cytosol, plastid	54.82	54.38
Zm00001d039625_P001	Maize	mitochondrion, plastid	54.22	54.33
Zm00001d037626_P001	Maize	plastid	53.01	54.32
EES00199	Sorghum	cytosol, mitochondrion, plastid	54.82	54.27
EES19134	Sorghum	plastid	52.61	54.13
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	51.81	53.09
PGSC0003DMT400060086	Potato	cytosol, plastid	50.6	53.05
TraesCS1A01G118300.2	Wheat	cytosol, mitochondrion	51.61	52.88
Os05t0178400-01	Rice	plasma membrane	52.01	52.75
HORVU1Hr1G025690.4	Barley	cytosol, mitochondrion	51.41	52.67
TraesCS1B01G138000.1	Wheat	cytosol, mitochondrion	51.2	52.47
PGSC0003DMT400052115	Potato	plastid	54.42	52.12
PGSC0003DMT400017950	Potato	plastid	54.82	52.1
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	50.6	51.22
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	55.02	50.28
HORVU1Hr1G084450.3	Barley	plastid	61.45	49.68
PGSC0003DMT400034814	Potato	cytosol	19.88	46.92
PGSC0003DMT400008785	Potato	cytosol	33.53	41.03

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102605203	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M1CGW2	PFAM:PF01603	EnsemblPlantsGene:PGSC0003DMG400026132	PGSC:PGSC0003DMG400026132	EnsemblPlants:PGSC0003DMT400067211
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371	UniParc:UPI0002965E6E
RefSeq:XP_006353657.1	SEG:seg	:	:	:	:

Description

Protein phosphatase 2a, regulatory subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400026132]

Coordinates

chr6:+:46075664..46080217

Molecular Weight (calculated)

56988.0 Da

IEP (calculated)

7.958

GRAVY (calculated)

-0.133

Length

498 amino acids

Sequence
(BLAST)

001: MWKHFLSKLP KKSLKSESVD LGRGNSDSHS PNASSNLGPG RPNSVPRRTS SVVFPASVIA GIEPLISFKD VPSSEKMNLF ISKLSLCCVD FDFRDPTKNV
101: AEKELKRATL FELLDFVSAN PPKFSEPAIL ALCKTCAVNL FRVFPPNYRS NSSQTSENDD DEPTFDPAWP HLQIVYDLLL KFVTSSSLEA KVAKKYINHQ
201: FILKLLDLFD SEDPRERDCL KAILHRIYGK FMVHRPYIRK SISNMFYRVV FESEKHNGIA ELLEIFGSVV TGFALPLKEE HKIFLSRTLI PLHKPKSLGI
301: YFQQLSYCIN QFIEKDPKLA STVIRGLLKY WPITSTQKEV MFLSELEEIL EVINMAEFQK VMVPLFWRIG CCINSYHFQV AERALFLWNN DQIVNLIAHN
401: RHVILPIIFP AVESNAQNHW NHAVQNLSLN VRRMFSEMDD VLFLACHSHY KEEQEKINLE SEKRKEAWEQ LETAASLRPP VAGNIAVLVM PLATSITC

Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)

001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC

Arabidopsis Description

B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.