Factsheet for Zm00001d009500_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18643	Sorghum	plastid	85.4	85.23
Zm00001d038944_P003	Maize	plastid	84.2	84.03
TraesCS1A01G382900.2	Wheat	plastid	72.4	72.69
TraesCS1B01G408600.1	Wheat	plastid	72.4	72.4
TraesCS1D01G390600.1	Wheat	plastid	72.4	72.4
Os05t0555100-01	Rice	plastid	60.8	67.71
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	62.6	64.94
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	61.4	61.4
GSMUA_AchrUn_...	Banana	cytosol	57.6	61.15
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	47.6	60.56
CDX87083	Canola	cytosol	42.2	59.94
VIT_04s0008g04270.t01	Wine grape	mitochondrion	58.6	59.55
HORVU1Hr1G084450.3	Barley	plastid	73.0	59.25
CDY05497	Canola	mitochondrion, plastid	57.2	58.97
CDX80521	Canola	plastid	58.4	58.87
KRH52526	Soybean	cytosol	58.4	58.75
KRH05059	Soybean	cytosol, mitochondrion, plastid	57.8	58.74
KRH61853	Soybean	plastid	58.2	58.67
CDY54903	Canola	mitochondrion, plastid	57.0	58.64
CDX88186	Canola	cytosol, plastid	58.0	58.59
Bra009846.1-P	Field mustard	plastid	58.0	58.59
Bra020504.1-P	Field mustard	mitochondrion, plastid	56.6	58.11
Solyc06g065690.2.1	Tomato	cytosol, plastid	57.6	57.83
KRH16045	Soybean	cytosol, mitochondrion, plastid	56.8	57.72
PGSC0003DMT400067211	Potato	cytosol, plastid	57.4	57.63
GSMUA_Achr8P26100_001	Banana	cytosol	54.4	56.67
Solyc12g006920.1.1	Tomato	plastid	56.2	55.53
PGSC0003DMT400002753	Potato	plastid	55.8	55.14
VIT_11s0016g04500.t01	Wine grape	cytosol	58.2	54.49
KRH03791	Soybean	cytosol	53.6	52.14
Zm00001d043447_P001	Maize	cytosol	17.6	51.16
KRH56674	Soybean	cytosol	52.4	50.87
Zm00001d037626_P001	Maize	plastid	48.0	49.38
Zm00001d039625_P001	Maize	mitochondrion, plastid	48.6	48.89
Zm00001d049642_P001	Maize	cytosol, plastid	46.0	45.82
Zm00001d025714_P001	Maize	mitochondrion	46.6	45.69
Zm00001d003256_P001	Maize	cytosol, mitochondrion	46.4	45.49
Zm00001d035140_P002	Maize	plastid	45.6	45.06
Zm00001d005501_P001	Maize	cytosol	44.6	41.45
Zm00001d019363_P001	Maize	cytosol	44.4	41.19
Zm00001d034817_P001	Maize	cytosol	48.2	40.57
Zm00001d013544_P002	Maize	cytosol, plastid	42.4	40.54
Zm00001d033370_P001	Maize	plastid	43.0	38.88
Zm00001d049469_P001	Maize	mitochondrion	13.4	36.81
Zm00001d006254_P001	Maize	cytosol	30.0	32.4

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A1D6FJS2	ProteinID:AQK92010.1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF13	SUPFAM:SSF48371
UniParc:UPI0008443424	EnsemblPlantsGene:Zm00001d009500	EnsemblPlants:Zm00001d009500_P002	EnsemblPlants:Zm00001d009500_T002	SEG:seg	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform

Coordinates

chr8:+:67554896..67557110

Molecular Weight (calculated)

56283.8 Da

IEP (calculated)

7.641

GRAVY (calculated)

-0.094

Length

500 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RRSSASGDSG HCSSGAGIQR TSSCGSIPPG RPPASAIRRM SSAVFPSSVV AGIEPLVSFK DVPSSEKQSL FVSKLSLCCV VFDFSDPDRS
101: SVEKDIKRQA LLDLIEFVES TNARFSEAAV VACSRMCAVN LFRAFPASCR SGGSSGVGEC DEDEPMFDTG WCHLHLVYEL LLKFIGSSSL DAKIGKKHFD
201: HSFIVKLLDL LHSEDPRERD CVKNILHRVY GKFMVHRPFI RRAASNVFYQ FVFETDRHNG IAELLEVFGS VISGFALPLK EEHKTFLWRV LVPLHKPKSL
301: GAYLQQLTYC VTQFIEKDPE LASPVIIGLL RYWPITNCQK EVMFLSEIEE ILEATSQAEF QKCMAPLFRR IAHCITSAHF QYPKCHMESD SFYITCSYRL
401: HYKPNLIGAL EQNIQNHWNQ AVLNLAVNVK KMFSEMDGDH FSSCLARYKE EEERLVSLEA KRKLTWEKLE SAAAFQPVTG QTAVLVGHQP SANMIANLIF

Best Arabidopsis Sequence Match ( AT3G26020.1 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.