Factsheet for GSMUA_Achr6P34510_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	76.59	63.91
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	77.61	63.28
GSMUA_Achr8P26100_001	Banana	cytosol	76.34	62.5
CDX87083	Canola	cytosol	50.38	56.25
EES03447	Sorghum	plastid	70.74	55.6
Zm00001d038944_P003	Maize	plastid	70.48	55.29
EES18643	Sorghum	plastid	70.48	55.29
TraesCS1D01G390600.1	Wheat	plastid	69.72	54.8
TraesCS1A01G382900.2	Wheat	plastid	69.21	54.62
TraesCS1B01G408600.1	Wheat	plastid	69.21	54.4
GSMUA_AchrUn_...	Banana	cytosol	34.1	50.76
VIT_04s0008g04270.t01	Wine grape	mitochondrion	63.36	50.61
GSMUA_Achr6P29780_001	Banana	mitochondrion	47.84	50.13
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	55.22	49.43
VIT_11s0016g04500.t01	Wine grape	cytosol	66.67	49.06
KRH52526	Soybean	cytosol	61.58	48.69
KRH61853	Soybean	plastid	60.81	48.19
KRH56674	Soybean	cytosol	62.6	47.77
KRH05059	Soybean	cytosol, mitochondrion, plastid	59.8	47.76
KRH03791	Soybean	cytosol	62.34	47.67
Solyc12g006920.1.1	Tomato	plastid	61.32	47.63
Zm00001d009500_P002	Maize	plastid	60.56	47.6
KRH16045	Soybean	cytosol, mitochondrion, plastid	59.54	47.56
PGSC0003DMT400002753	Potato	plastid	61.07	47.43
CDY05497	Canola	mitochondrion, plastid	58.27	47.22
CDY54903	Canola	mitochondrion, plastid	58.27	47.12
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	59.29	46.6
Solyc06g065690.2.1	Tomato	cytosol, plastid	59.03	46.59
Bra020504.1-P	Field mustard	mitochondrion, plastid	57.51	46.41
PGSC0003DMT400067211	Potato	cytosol, plastid	58.78	46.39
GSMUA_Achr7P17010_001	Banana	mitochondrion	48.35	46.12
GSMUA_Achr7P07360_001	Banana	cytosol	48.6	46.02
Os05t0555100-01	Rice	plastid	52.16	45.66
GSMUA_Achr8P32030_001	Banana	cytosol	55.73	45.53
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	53.18	44.85
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	55.47	44.67
Bra009846.1-P	Field mustard	plastid	56.23	44.65
CDX80521	Canola	plastid	56.23	44.56
CDX88186	Canola	cytosol, plastid	55.98	44.44
HORVU1Hr1G084450.3	Barley	plastid	69.47	44.32
GSMUA_AchrUn_...	Banana	cytosol	14.25	40.0
GSMUA_Achr3P00600_001	Banana	mitochondrion	35.37	27.91
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	12.98	25.89

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr6G34510_001	EnsemblPlants:GSMUA_Achr6P34510_001	EnsemblPlants:GSMUA_Achr6T34510_001
InterPro:IPR011989	UniProt:M0TCP4	PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF31
SUPFAM:SSF48371	UniParc:UPI000295B158	SEG:seg	:	:	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Source:GMGC_GENE;Acc:GSMUA_Achr6G34510_001]

Coordinates

chr6:+:33092547..33095771

Molecular Weight (calculated)

45026.8 Da

IEP (calculated)

7.854

GRAVY (calculated)

-0.126

Length

393 amino acids

Sequence
(BLAST)

001: MWKQFLSKLP RKSSKSDASS GSAHSHLSNN GMASANGNPI QRTSSGNVVS SRSATHNLFI SKMKLCYLVD YVDAEEELMF DPAWSHLQLV YDLLLKLLEL
101: FDSEDPREKD CLKTILHRIY GKFMVHRPFI RKAVSNIFYR FVFETDRHNG IAELLEVFGS VISGFALPLK EEHKIFLWRA LIPLHKPKTL GVYLQQLTYC
201: MTQFIEKEPM LASSVIKGLL RYWPVTNSQK EVMFLSELEE VLESTSPAEL QKCVIPLFRR IGFCINSSHF QVAERALLMW NNDHVTSLAS QNQQAIMPLI
301: LPALERNIRS HWNQAVLNLT ENVKKMLSEM NEELFTACKK KFEDEEEKRV AMEEKRRMIW ECLETTAAFQ PVTSNTAVLV IPAITPPIAA VLS

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.