Factsheet for GSMUA_Achr7P07360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P17010_001	Banana	mitochondrion	84.82	85.44
GSMUA_Achr6P29780_001	Banana	mitochondrion	63.13	69.87
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	69.4	64.14
TraesCS4B01G026300.1	Wheat	mitochondrion	76.87	61.82
KXG37844	Sorghum	plastid	77.83	61.64
Zm00001d013544_P002	Maize	cytosol, plastid	77.59	61.57
VIT_13s0019g04920.t01	Wine grape	plastid	66.99	61.5
TraesCS4D01G023700.1	Wheat	mitochondrion	76.39	61.43
Os03t0681800-00	Rice	plasma membrane	77.35	60.0
Zm00001d033370_P001	Maize	plastid	78.31	58.77
PGSC0003DMT400060086	Potato	cytosol, plastid	66.02	57.68
Bra003201.1-P	Field mustard	golgi	52.29	56.96
KRH35993	Soybean	cytosol	61.2	52.37
GSMUA_Achr8P32030_001	Banana	cytosol	60.48	52.18
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	54.94	51.94
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	56.39	50.21
GSMUA_AchrUn_...	Banana	cytosol	31.81	50.0
AT3G54930.2	Thale cress	cytosol, plastid	59.76	49.9
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.31	49.59
CDY56962	Canola	cytosol, plastid	58.55	49.39
Bra007117.1-P	Field mustard	cytosol, plastid	58.55	49.39
CDY07514	Canola	cytosol	58.07	49.28
CDX67616	Canola	cytosol	58.07	49.28
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	46.02	48.6
GSMUA_AchrUn_...	Banana	cytosol	51.81	45.65
CDX73425	Canola	cytosol, plastid	58.55	45.25
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	51.57	44.4
GSMUA_Achr8P26100_001	Banana	cytosol	50.84	43.96
GSMUA_AchrUn_...	Banana	cytosol	14.7	43.57
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	15.42	32.49
GSMUA_Achr3P00600_001	Banana	mitochondrion	33.73	28.11

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr7G07360_001	EnsemblPlants:GSMUA_Achr7P07360_001
EnsemblPlants:GSMUA_Achr7T07360_001	InterPro:IPR011989	UniProt:M0TFH6	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI00029696C5	SEG:seg	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:GMGC_GENE;Acc:GSMUA_Achr7G07360_001]

Coordinates

chr7:-:5485835..5494389

Molecular Weight (calculated)

47273.3 Da

IEP (calculated)

7.456

GRAVY (calculated)

-0.134

Length

415 amino acids

Sequence
(BLAST)

001: MFTKIMKRGN RKGPKSEAAE PAAAAAVPGS NVTVNHASRT AVPSSGAAAG AHHLPASPAG ATPQIESLPL FRDVPVAERQ ALFSSSIRLG ESVQEELVRT
101: LVYELLLRYV ISSDTDTKVA KRYIDHSFVL RILDLFESED PREREYLKTI LHRIYGKFMV HRPFIRKAIN NIFYRFIFET ERHSGIGELL EILGSIINGF
201: ALPMKEEHKL FLVRVLIPLH RPKPVGMYHQ QLSYCIVQFV EKDYKLADTI IRGLLKYWPV TNCQKEVLFL GELEEVLEAT QPAEFQRCMV PLFKQISHCL
301: SSSHFQVAER ALFLWNNDHI VSLIAQNRSV IFPIIFEALE KNMQGHWNQA VHGLTANVRK MFLDMDSELF EACQLQYIEK EENAKSLEEK RESAWRRLEA
401: IVEAKAAGED MVVAN

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.