Factsheet for GSMUA_AchrUn_randomP01670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P32030_001	Banana	cytosol	72.14	21.0
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	62.14	19.82
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	63.57	18.24
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	58.57	17.6
GSMUA_Achr7P17010_001	Banana	mitochondrion	44.29	15.05
GSMUA_Achr7P07360_001	Banana	cytosol	43.57	14.7
GSMUA_Achr6P29780_001	Banana	mitochondrion	39.29	14.67
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	40.0	14.25
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	40.0	11.62
GSMUA_Achr8P26100_001	Banana	cytosol	38.57	11.25
GSMUA_AchrUn_...	Banana	cytosol	35.71	10.62
GSMUA_Achr3P00600_001	Banana	mitochondrion	23.57	6.63
GSMUA_AchrUn_...	Banana	cytosol	12.14	6.44
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	2.14	1.52

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_AchrUn_randomG01670_001	EnsemblPlants:GSMUA_AchrUn_randomP01670_001	EnsemblPlants:GSMUA_AchrUn_randomT01670_001
InterPro:IPR011989	UniProt:M0U5H9	PFAM:PF01603	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46
SUPFAM:SSF48371	UniParc:UPI0002952D71	:	:	:	:

Description

transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01670_001]

Coordinates

chrchrUn_random:+:6601871..6602631

Molecular Weight (calculated)

16375.8 Da

IEP (calculated)

6.007

GRAVY (calculated)

-0.261

Length

140 amino acids

Sequence
(BLAST)

001: MYCLATLDNI KLETLSNLFY HEKIVAERSL FLWNNDHIEN LIKQNDKVLL PIIFPLLERN AKCHWNQAVQ SLTLNVCEIF SDNNHELFAD CLKKFEEDEV
101: KGKEIQLKRE STWKRVEELA TTKAASNEPV LIPCIIRHPV

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.