Factsheet for GSMUA_Achr7P17010_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P07360_001	Banana	cytosol	85.44	84.82
GSMUA_Achr6P29780_001	Banana	mitochondrion	63.11	69.33
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	70.39	64.59
VIT_13s0019g04920.t01	Wine grape	plastid	69.66	63.5
Zm00001d013544_P002	Maize	cytosol, plastid	78.88	62.14
KXG37844	Sorghum	plastid	78.88	62.02
TraesCS4B01G026300.1	Wheat	mitochondrion	77.18	61.63
TraesCS4D01G023700.1	Wheat	mitochondrion	76.94	61.43
Os03t0681800-00	Rice	plasma membrane	77.43	59.63
Zm00001d033370_P001	Maize	plastid	79.85	59.49
PGSC0003DMT400060086	Potato	cytosol, plastid	66.02	57.26
Bra003201.1-P	Field mustard	golgi	52.91	57.22
KRH35993	Soybean	cytosol	63.11	53.61
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	55.58	52.16
GSMUA_Achr8P32030_001	Banana	cytosol	60.68	51.98
GSMUA_AchrUn_...	Banana	cytosol	32.52	50.76
CDX67616	Canola	cytosol	59.71	50.31
CDY07514	Canola	cytosol	59.71	50.31
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	56.8	50.21
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	59.47	50.2
AT3G54930.2	Thale cress	cytosol, plastid	60.19	49.9
CDY56962	Canola	cytosol, plastid	59.47	49.8
Bra007117.1-P	Field mustard	cytosol, plastid	59.47	49.8
GSMUA_Achr6P34510_001	Banana	cytosol, plastid	46.12	48.35
CDX73425	Canola	cytosol, plastid	59.95	46.0
GSMUA_AchrUn_...	Banana	cytosol	15.05	44.29
GSMUA_AchrUn_...	Banana	cytosol	50.49	44.16
GSMUA_Achr2P08330_001	Banana	cytosol, mitochondrion	51.46	43.98
GSMUA_Achr8P26100_001	Banana	cytosol	50.73	43.54
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	15.78	32.99
GSMUA_Achr3P00600_001	Banana	mitochondrion	33.01	27.31

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	EnsemblPlantsGene:GSMUA_Achr7G17010_001	EnsemblPlants:GSMUA_Achr7P17010_001
EnsemblPlants:GSMUA_Achr7T17010_001	InterPro:IPR011989	UniProt:M0TI88	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI000295C5C8	SEG:seg	:

Description

Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:GMGC_GENE;Acc:GSMUA_Achr7G17010_001]

Coordinates

chr7:+:18120109..18134932

Molecular Weight (calculated)

47273.8 Da

IEP (calculated)

8.559

GRAVY (calculated)

-0.104

Length

412 amino acids

Sequence
(BLAST)

001: MLNKIMKRAN RKGPKAEVAA EPPPASAPAS SSVTVNHASR TAVPSPGGAA NLLPTGAAAP QIESLPLFRD VPVPERQALF LRKLQICAPV QEQLIRTLVY
101: ELLLRFVISS DTDTKVAKRY IDHTFVLRIL DLFDSEDPRE REYLKTILHR IYGKFMIHRP FIRKAINNIF YRFIFETQRH SGIGELLEIL GSIINGFALP
201: MKEEHKLFLV RALIPLHKPK LVGMYHQQLS YCIVQFVEKD YKLADTVVRG LLKYWPVINC QKEVLFLGEL EEVLEVTQPV EFQRCMVPLF KQIARCLSSS
301: HFQVAERALF LWNNDHIVSL IAQNRSVIFP IIFEALEKNM QAHWNQAIHG LTANVRKMFL DMDSELFEEC QRQYEEKEAK AKSVEEQREL AWRRLEAVVE
401: AKAGGEDMVL AN

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.