Factsheet for Bra007117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56962	Canola	cytosol, plastid	99.19	99.19
AT3G54930.2	Thale cress	cytosol, plastid	91.46	90.54
CDX73425	Canola	cytosol, plastid	98.37	90.13
Bra003201.1-P	Field mustard	golgi	65.65	84.78
GSMUA_Achr6P29780_001	Banana	mitochondrion	48.58	63.73
PGSC0003DMT400060086	Potato	cytosol, plastid	60.98	63.16
VIT_13s0019g04920.t01	Wine grape	plastid	57.52	62.61
Bra029801.1-P	Field mustard	cytosol, plastid	61.18	61.93
Bra001296.1-P	Field mustard	cytosol, plastid	61.38	61.76
HORVU4Hr1G003930.1	Barley	cytosol, peroxisome	55.49	60.8
GSMUA_Achr7P17010_001	Banana	mitochondrion	49.8	59.47
Bra028832.1-P	Field mustard	cytosol, plastid	57.52	58.71
GSMUA_Achr7P07360_001	Banana	cytosol	49.39	58.55
TraesCS4B01G026300.1	Wheat	mitochondrion	59.15	56.4
TraesCS4D01G023700.1	Wheat	mitochondrion	59.15	56.4
KXG37844	Sorghum	plastid	59.15	55.53
KRH35993	Soybean	cytosol	54.47	55.26
Zm00001d013544_P002	Maize	cytosol, plastid	58.33	54.88
Os03t0681800-00	Rice	plasma membrane	58.13	53.46
Zm00001d033370_P001	Maize	plastid	59.96	53.35
Bra039553.1-P	Field mustard	plastid	52.85	52.63
Bra019720.1-P	Field mustard	plastid	52.44	52.33
Bra031294.1-P	Field mustard	cytosol, plastid	53.86	52.06
Bra012790.1-P	Field mustard	mitochondrion, plastid	51.42	51.74
Bra025178.1-P	Field mustard	cytosol, plastid	52.44	51.6
Bra025179.1-P	Field mustard	cytosol	48.98	50.84
Bra036352.1-P	Field mustard	cytosol, plastid	52.85	49.15
Bra036351.1-P	Field mustard	cytosol	47.76	48.96
Bra031075.1-P	Field mustard	mitochondrion	30.08	46.84
Bra020504.1-P	Field mustard	mitochondrion, plastid	46.34	46.82
Bra009846.1-P	Field mustard	plastid	45.53	45.25
Bra017338.1-P	Field mustard	cytosol	21.54	34.53

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra007117	EnsemblPlants:Bra007117.1
EnsemblPlants:Bra007117.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
InterPro:IPR011989	UniProt:M4CSC5	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF45	SUPFAM:SSF48371	UniParc:UPI00025429A6	SEG:seg	:	:

Description

AT3G54930 (E=2e-228) | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative

Coordinates

chrA09:-:27414425..27416055

Molecular Weight (calculated)

57186.6 Da

IEP (calculated)

6.175

GRAVY (calculated)

-0.397

Length

492 amino acids

Sequence
(BLAST)

001: MFNKIKKLSQ KKFNKSDQHN QDNNPTNTNV VRSSRTTPTT ASPLPNGESQ TPAPSPSQTP NHPMFTSTPT LEVLPLLKDV SSSDRPLLFM KKAHMCSCQC
101: DFSDTLIMPR EKEIKRQTLL ELVDFLHSSS GKVNETMQSE LIRMVSANIF RSLPPAHYEN TGAPPEGNDP EEEEPYLEPW WPHLQLVYEL LLRYVVSSEI
201: EPKTAKKFIS HTFVSRLLDL FDSEDPRERE YLKTVLHRIY GKFIFHRPFI RCSVYNIFYK FLYETERCIG IGELLEILGS VINGFTVPMR EEHRLYLVKA
301: ILPLHKSKSI SVYHQQLSYC VVQFVEKDYK LADTVIRGLL KYWPLTNCNK EVLFLGELEE VLDVTEPSEF QHCVVPLFTQ IGKCLNSAHF QVAERALFLW
401: NNEHIVGLIA ENKDVIFSII FEALEKNMKG HWNQAVHGLS ENVRRMFMEM DNDLFEECEK QYQENEAKTW ELLEQREMTW KRLEEAASLV AN

Best Arabidopsis Sequence Match ( AT3G54930.2 )
(BLAST)

001: MFNKIIKLGQ KKFNKSDQHH QDNNNNNNNT STNTVVRGSR TTTPAPSSVS NGESQTTAQS PSQTPNHPMF TTTPILEVLP LLKDVSSSDR PLLFMKKAHM
101: CSCHCDFSDT LIMPREKEIK RQTLLELVDF LHSSSGKVNE TMQSELIRMV SANIFRCLPP AYHENTGAPP EGNDPEEEEP YLEPWWPHLQ LVYELLLRYV
201: VSSEIEPKTA KKFINHTFVS RLLDLFDSED PREREYLKTV LHRIYGKFIF HRPFIRCSIY NIFYKFLYET ERCIGIGELL EILGSVINGF TVPMREEHRL
301: YLVKAILPLH KSKGISIYHQ QLAYCVTQFV EKDYKLADTV IRGLLKFWPL TNCQKEVLFL GELEEVLDAT EPSEFQQCVV PLFTQIGKCL NSAHFQVAER
401: ALFLWNNEHI VGLIAQNKDV IFPIIFEALE RNMKGHWNQA VHGLSENVRR MFLEMDTELF EECEKQYLEN EAKACELLEQ RELTWKRLEE AASLAAN

Arabidopsis Description

B'EPSILONSerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9SV41]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.