Factsheet for Bra017338.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04189	Canola	cytosol, golgi, nucleus	71.01	96.04
Bra025179.1-P	Field mustard	cytosol	64.5	41.77
Bra036351.1-P	Field mustard	cytosol	63.52	40.62
Bra031294.1-P	Field mustard	cytosol, plastid	46.58	28.09
Bra039553.1-P	Field mustard	plastid	43.97	27.33
Bra025178.1-P	Field mustard	cytosol, plastid	44.3	27.2
Bra012790.1-P	Field mustard	mitochondrion, plastid	43.0	26.99
Bra019720.1-P	Field mustard	plastid	43.32	26.98
Bra036352.1-P	Field mustard	cytosol, plastid	43.32	25.14
Bra020504.1-P	Field mustard	mitochondrion, plastid	39.09	24.64
Bra009846.1-P	Field mustard	plastid	39.09	24.24
Bra001296.1-P	Field mustard	cytosol, plastid	37.78	23.72
Bra029801.1-P	Field mustard	cytosol, plastid	36.81	23.25
Bra007117.1-P	Field mustard	cytosol, plastid	34.53	21.54
Bra028832.1-P	Field mustard	cytosol, plastid	33.22	21.16
Bra003201.1-P	Field mustard	golgi	20.52	16.54
Bra031075.1-P	Field mustard	mitochondrion	12.05	11.71

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra017338	EnsemblPlants:Bra017338.1
EnsemblPlants:Bra017338.1-P	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234
GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	UniProt:M4DLF7	PFAM:PF01603	InterPro:PP2A_B56
PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI00025421C9	SEG:seg

Description

AT3G26030 (E=6e-053) ATB' DELTA | ATB' DELTA; protein phosphatase type 2A regulator

Coordinates

chrA09:-:14380910..14382117

Molecular Weight (calculated)

35424.0 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.409

Length

307 amino acids

Sequence
(BLAST)

001: MFKQILGKLP KKPSSAKFWD NGESQAPDNS HHQGDDEVRS QSSSNGDCVS VEVLPRLKDV SISEKLRLCC VVFDFAAEPQ VNLKEKEIKR QTLLEYVISS
101: GNAKFPESVI QEAVEIVSAN LFFFFLIGFG RSRRRIFEPF LASLADCLRV PSKTRVASPN TDAKISKKYI DPTFVLNLLH LFDSEDQKER ETERALYLWN
201: NDHVSDLVRQ NSRIILPIVF PALEKNGSSH WNQTVKNLTE NVLKVLSDTN PECSRKFQED QQNEEDTKKK NGETWRQQEE IVIKWLSNSF FLHFLIFFFF
301: FFAGLYA

Best Arabidopsis Sequence Match ( AT3G26030.1 )
(BLAST)

001: MFKQILGKLP KKTSAKFWDN GESQTLDNNN NQGGGDEVLS QRTSSNGDTS LDCVSSFDVL PRLRDVSISE KQELFLKKLR LCCLVFDFVA EPQQNFKEKE
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK

Arabidopsis Description

B'DELTASerine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.