Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017338.1-P | Field mustard | cytosol | 96.04 | 71.01 |
| CDY13606 | Canola | cytosol | 59.47 | 28.48 |
| CDX83579 | Canola | cytosol | 58.59 | 28.0 |
| CDX87083 | Canola | cytosol | 32.6 | 21.02 |
| CDX90593 | Canola | cytosol, plastid | 41.85 | 20.47 |
| CDY09766 | Canola | mitochondrion, plastid | 41.41 | 20.22 |
| CDY44320 | Canola | cytosol, plastid | 43.17 | 19.29 |
| CDY38628 | Canola | cytosol, mitochondrion | 43.17 | 19.25 |
| CDX83578 | Canola | cytosol | 39.65 | 18.67 |
| CDY22925 | Canola | plastid | 40.53 | 18.62 |
| CDX98102 | Canola | cytosol, plastid | 37.44 | 18.36 |
| CDY48287 | Canola | plastid | 40.09 | 18.35 |
| CDY05497 | Canola | mitochondrion, plastid | 38.33 | 17.94 |
| CDY54903 | Canola | mitochondrion, plastid | 38.33 | 17.9 |
| CDY13605 | Canola | cytosol, plastid | 40.09 | 17.88 |
| CDX80521 | Canola | plastid | 38.33 | 17.54 |
| CDX88186 | Canola | cytosol, plastid | 37.89 | 17.37 |
| CDY54611 | Canola | cytosol | 37.44 | 17.35 |
| CDY30030 | Canola | plastid | 37.89 | 17.34 |
| CDY41574 | Canola | cytosol | 37.0 | 17.21 |
| CDY07942 | Canola | cytosol, plastid | 35.24 | 16.29 |
| CDX73997 | Canola | cytosol, plastid | 34.8 | 16.16 |
| CDY56962 | Canola | cytosol, plastid | 33.04 | 15.24 |
| CDY04885 | Canola | cytosol, plastid | 30.84 | 14.52 |
| CDX67616 | Canola | cytosol | 31.28 | 14.52 |
| CDX73425 | Canola | cytosol, plastid | 33.92 | 14.34 |
| CDY07514 | Canola | cytosol | 30.84 | 14.31 |
| CDY40986 | Canola | nucleus, plastid | 59.91 | 14.26 |
| CDY44370 | Canola | cytosol, plastid | 29.96 | 14.08 |
| CDX99733 | Canola | nucleus, plastid | 60.35 | 13.54 |
| CDY35507 | Canola | golgi | 15.86 | 11.88 |
| CDY67412 | Canola | mitochondrion | 16.74 | 11.73 |
| CDY08231 | Canola | mitochondrion | 16.3 | 10.98 |
| CDY50168 | Canola | cytosol | 6.61 | 9.32 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | GO:A0A078EUD1 | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY04189 |
| ProteinID:CDY04189 | ProteinID:CDY04189.1 | GO:GO:0000159 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008601 |
| GO:GO:0009987 | GO:GO:0019888 | GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00117889001 | InterPro:IPR011989 | PFAM:PF01603 |
| InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI0004EF349B |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g19670D
Coordinates
chrLK031949:+:1089313..1090514
Molecular Weight (calculated)
26622.5 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.546
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKQILGKKP SSAKFWDNGE SQAPDNSHHQ GDDEMVSANL FFFFLIGFGR SRRRIFEPFL ASLADCLRVP SKTRVASPNT DAKISKKYID PTFVLNLLHL
101: FDSEDQKERE TERALYLWNN DHVSDLVRQN SRIILPIVFP ALEKNGSSHW NQTVKNLTEN VLKVLSDTNP ECSRKFQEDQ QNEEDTKKKN GETWRQQEEI
201: VIKWLSNSFF LHFLIFFFFL LVFTPER
101: FDSEDQKERE TERALYLWNN DHVSDLVRQN SRIILPIVFP ALEKNGSSHW NQTVKNLTEN VLKVLSDTNP ECSRKFQEDQ QNEEDTKKKN GETWRQQEEI
201: VIKWLSNSFF LHFLIFFFFL LVFTPER
001: MFKQILGKLP KKTSAKFWDN GESQTLDNNN NQGGGDEVLS QRTSSNGDTS LDCVSSFDVL PRLRDVSISE KQELFLKKLR LCCLVFDFVA EPQQNFKEKE
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK
101: IKRQTLLEVV DYVISSGNGK FPESVIQEAT KMISANLFSN PHRQWKNKTP EALDLEEEEG SLNPSWPHLQ IVYEFLLRIV ASPNTDPKIS KKYIDHTFVL
201: KLLDLFDSED PREREYLKTI LHRIYGRFMV HRPFIRKTMN NILYDFIFET GKHSGIAEFL EVLGSIINGF ALPLKEEHKL FLTRVLIPLH KLKCLPNYHQ
301: QLSYCVIQFV EKDCKLADTV IRGMLKYWPV TNSAKEIMFL NELEEILEAT QLTEFERCMV PLSRQIAQCL SSSHFQVAER ALYLWNNDHV TNLVRQNSRI
401: ILPIVFPALE KNGSSHWNQA VKNLTENVLK VLSDTNPDLF EECLHKFQED QQKAEDTKKK NGETWRQLEE IVASMAK
Arabidopsis Description
B'DELTASerine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.