CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028832.1-P	Field mustard	cytosol, plastid	98.76	98.76
CDY44370	Canola	cytosol, plastid	98.13	97.93
AT5G03470.1	Thale cress	cytosol	81.12	78.99
CDY41574	Canola	cytosol	77.59	76.64
CDY54611	Canola	cytosol	77.8	76.53
CDY07942	Canola	cytosol, plastid	77.8	76.37
CDX73997	Canola	cytosol, plastid	77.18	76.07
KRH67758	Soybean	plastid	69.5	71.28
KRG96039	Soybean	cytosol, plastid	68.88	71.09
KRH19952	Soybean	cytosol	69.92	69.77
KRH32554	Soybean	cytosol	70.33	69.75
CDY08231	Canola	mitochondrion	47.72	68.25
VIT_08s0007g04850.t01	Wine grape	cytosol	69.29	66.53
Solyc10g083920.1.1	Tomato	nucleus	67.84	66.46
Solyc09g008400.2.1	Tomato	nucleus	67.63	66.13
PGSC0003DMT400072691	Potato	cytosol, mitochondrion	67.43	66.06
CDY67412	Canola	mitochondrion	42.74	63.58
CDX98102	Canola	cytosol, plastid	57.68	60.04
CDY35507	Canola	golgi	37.55	59.74
CDY56962	Canola	cytosol, plastid	59.54	58.33
CDX67616	Canola	cytosol	58.3	57.46
CDY07514	Canola	cytosol	57.88	57.06
CDY30030	Canola	plastid	58.09	56.45
CDY48287	Canola	plastid	56.43	54.84
CDX87083	Canola	cytosol	39.83	54.55
CDY09766	Canola	mitochondrion, plastid	52.49	54.41
CDX90593	Canola	cytosol, plastid	52.28	54.31
CDY22925	Canola	plastid	55.6	54.25
CDX83578	Canola	cytosol	54.15	54.15
CDY38628	Canola	cytosol, mitochondrion	56.64	53.63
CDX73425	Canola	cytosol, plastid	59.75	53.63
CDY44320	Canola	cytosol, plastid	56.43	53.54
CDY13606	Canola	cytosol	52.07	52.95
CDX83579	Canola	cytosol	52.07	52.84
CDY13605	Canola	cytosol, plastid	54.15	51.28
CDY05497	Canola	mitochondrion, plastid	49.59	49.28
CDY54903	Canola	mitochondrion, plastid	49.17	48.77
CDX80521	Canola	plastid	49.79	48.39
CDX88186	Canola	cytosol, plastid	48.96	47.68
CDY50168	Canola	cytosol	13.07	39.13
CDY04189	Canola	cytosol, golgi, nucleus	14.52	30.84
CDY40986	Canola	nucleus, plastid	52.28	26.42
CDX99733	Canola	nucleus, plastid	52.49	25.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078ESG6	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDY04885
ProteinID:CDY04885	ProteinID:CDY04885.1	ncoils:Coil	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008601	GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00119602001	InterPro:IPR011989
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371
UniParc:UPI0004EDD39C	SEG:seg	:	:	:	:

Description

BnaAnng00670D

Coordinates

chrLK031958:+:533141..534920

Molecular Weight (calculated)

56346.0 Da

IEP (calculated)

6.417

GRAVY (calculated)

-0.445

Length

482 amino acids

Sequence
(BLAST)

001: MFKKMMKSGS RKPSRNDAGF DPNSTNMVVN HASRPSPLPP PSPTTTKQPP PMHSIEPLPL LRDLPPPERQ PLFLRKLQIC SFHFDFTDPT KNAREKEIKR
101: QTLLELVDYI QSGTAKIISE LCQEEMVKMI SSNIFRSLPA SAGQEPADPE EDEPYLDPNW PHLQLVYELL IRYVVPSDTD TKIAKRFIDH SFVSNLLELF
201: ETEDPRERDY LKTILHRIYG KFMVHRPFIR KGINNIFYRF VYETERHSGI GELLEIMGSI INGFALPMKE EHKLFLIRAL IPLHKPKPIG VYHQQLAYCV
301: VQFVEKDYRL ADTVIRGLLK YWPVTNCSKE VLFLGELEEV LEATQPVEFQ RCMVPLFQRV ARCLNSSHFQ VAERSLFLWN SEHIVVLIAQ NRSVILPIIF
401: ASLEKNTESH WNQAVHGLSE NIKRMFMEMD PELFEECQQE YEEKQSKSKE VEEQRQSRWR RLDEAVEERE RVVGEEDHMI IS

Best Arabidopsis Sequence Match ( AT5G03470.1 )
(BLAST)

001: MFKKIMKGAN RKASKAEAND SSMYGFDPPG RSGPGSNMIV NHASRGSLVP SSPNSMAAAT TQPPPMYSVE PLPLFRDVSV SERQSLFLRK LQICCFQFDF
101: TDTLKNAREK EIKRQTLLEL VDFIQSGAGK LTEVCQEEMV KMISVNIFRC LPPASHENTG QEPADLEEEE PYLEPSWPHL QLIYELLLRY IVPSDTDTKV
201: AKRYIDHSFV LRLLELFETE DPREREYLKT ILHRIYGKFM VHRPFIRKAM NHIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRALIPL
301: HKPKPIAMYH QQLSYCIVQF VEKDYKLADT VIRGLLKFWP VTNCTKEVLF LGELEEVLEA TQTVEFQRCM VPLFQQIARC LSSSNFQVAE RALFLWNNEH
401: VVGLIAQNRG VILPIIFASL EKNIESHWNQ AVHGLSANIK RMFMEMDPEL FEECQQQYEE KQAKSKQVEE QRQNRWRRLD EAVEERERED PMITS

Arabidopsis Description

B'ALPHAATB' ALPHA [Source:UniProtKB/TrEMBL;Acc:A0A178UNX1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.