CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09766	Canola	mitochondrion, plastid	96.55	96.34
Bra012790.1-P	Field mustard	mitochondrion, plastid	99.14	94.07
CDY48287	Canola	plastid	85.13	79.64
CDY22925	Canola	plastid	84.7	79.55
AT4G15415.5	Thale cress	cytosol, plastid	85.78	76.25
CDY38628	Canola	cytosol, mitochondrion	77.16	70.33
CDY44320	Canola	cytosol, plastid	76.94	70.28
CDX98102	Canola	cytosol, plastid	62.28	62.42
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	73.49	62.23
KRH73387	Soybean	cytosol, plastid	69.83	60.34
CDX83578	Canola	cytosol	62.5	60.17
KRH14754	Soybean	cytosol, plastid	69.4	60.07
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	70.04	59.63
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	59.48	59.23
CDY30030	Canola	plastid	62.28	58.27
CDY13605	Canola	cytosol, plastid	62.5	56.97
CDY41574	Canola	cytosol	59.7	56.76
CDX87083	Canola	cytosol	42.89	56.53
CDY54611	Canola	cytosol	59.27	56.12
CDX83579	Canola	cytosol	56.9	55.58
CDY13606	Canola	cytosol	56.68	55.49
CDX73997	Canola	cytosol, plastid	58.19	55.21
CDY07942	Canola	cytosol, plastid	57.76	54.58
CDY05497	Canola	mitochondrion, plastid	55.6	53.2
CDY54903	Canola	mitochondrion, plastid	55.17	52.67
CDY04885	Canola	cytosol, plastid	54.31	52.28
CDY44370	Canola	cytosol, plastid	53.45	51.35
CDX80521	Canola	plastid	53.66	50.2
CDX88186	Canola	cytosol, plastid	53.45	50.1
CDX67616	Canola	cytosol	51.29	48.67
CDY56962	Canola	cytosol, plastid	51.51	48.58
CDY07514	Canola	cytosol	50.86	48.26
CDX73425	Canola	cytosol, plastid	51.94	44.88
CDY08231	Canola	mitochondrion	31.68	43.62
CDY04189	Canola	cytosol, golgi, nucleus	20.47	41.85
CDY67412	Canola	mitochondrion	28.02	40.12
CDY50168	Canola	cytosol	13.79	39.75
CDY35507	Canola	golgi	23.71	36.3
CDY40986	Canola	nucleus, plastid	57.97	28.2
CDX99733	Canola	nucleus, plastid	57.97	26.58

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078DTV9	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDX90593
ProteinID:CDX90593	ProteinID:CDX90593.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008601
GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00151230001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371	UniParc:UPI0004EF42A8

Description

BnaA03g41880D

Coordinates

chrLK031863:-:1002009..1004352

Molecular Weight (calculated)

52778.8 Da

IEP (calculated)

8.152

GRAVY (calculated)

-0.213

Length

464 amino acids

Sequence
(BLAST)

001: MIKQIFGKLP KKTSKSSSHP NGEGGGVNPH HTPPPTSNRP NGVYEPLPSF RDVPASEKPT LFIKKLTMCC VLFDFTDPSK NLREKETKRQ TLLDLVDYIA
101: TVPTKFTDAA MQEIAKLAAI NLFRTFPTAA NHESKVLETL DGNDDEELAL EPAWPHLQLV YELLLRFVAS SMTDAKLAKR YVDHSFVLKL LELFDSVDQR
201: EREYLKTILH RIYGKFMVHR PFIRKAINNI FYRFVFETER HNGIAELLEI LGSIINGFAL PLKEEHKLFL FVEKDSKLAD TVVRGLLRYW PVTNSSKEVM
301: FLGELEEVLE GTQAAEFQRC MVPLFRRIAK CLNSSHFQVA ERALFLWNND HIRNLITQNL KVIMPIVFPA MERNMCSHWN QTVKNLTLNV RKVLAETDQA
401: LFDECLAKFQ EDEASKAEVA AKREATWKLL EDLAASKTVS SEAVLVTRFT SSVTITTSGK ASGS

Best Arabidopsis Sequence Match ( AT3G21650.2 )
(BLAST)

001: MIKQIFGKLP RKPSKSLQND SNGEGGVNNS YYASNSSTTS ISKPSSTSSK SSSASGSRVA NGTLAPNSMS SNRNTNQGKK PLGGDAVVQA GPFPSSGGVY
101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE
201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE
301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC
401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK
501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS

Arabidopsis Description

B'ZETAProtein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V736]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.