CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14754	Soybean	cytosol, plastid	96.46	96.64
VIT_12s0059g01170.t01	Wine grape	mitochondrion, plastid	78.03	76.46
CDY44320	Canola	cytosol, plastid	68.9	72.83
CDY38628	Canola	cytosol, mitochondrion	68.72	72.5
Bra031294.1-P	Field mustard	cytosol, plastid	68.53	72.3
Bra039553.1-P	Field mustard	plastid	66.11	71.86
CDY22925	Canola	plastid	66.11	71.86
CDY48287	Canola	plastid	66.29	71.77
PGSC0003DMT400001856	Potato	cytosol, mitochondrion, plastid	72.63	71.56
AT4G15415.5	Thale cress	cytosol, plastid	69.27	71.26
Bra012790.1-P	Field mustard	mitochondrion, plastid	64.06	70.35
AT3G21650.2	Thale cress	nucleus, plastid	71.32	70.15
CDX90593	Canola	cytosol, plastid	60.34	69.83
CDY09766	Canola	mitochondrion, plastid	60.15	69.46
GSMUA_Achr9P19120_001	Banana	mitochondrion, plastid	58.66	67.6
KRG94414	Soybean	plastid	65.36	67.11
KRG90768	Soybean	extracellular, mitochondrion	11.36	64.89
KRH31415	Soybean	cytosol, plastid	62.38	64.3
KRG97478	Soybean	cytosol, plastid	61.83	64.22
KRG94343	Soybean	cytosol, plastid	63.87	63.99
KRH57624	Soybean	cytosol, mitochondrion	63.5	63.86
KRH67758	Soybean	plastid	55.68	63.62
KRG96039	Soybean	cytosol, plastid	55.31	63.6
KRH19952	Soybean	cytosol	55.87	62.11
KRH32554	Soybean	cytosol	55.87	61.73
KRH61853	Soybean	plastid	52.33	56.65
KRH52526	Soybean	cytosol	52.33	56.54
KRH16045	Soybean	cytosol, mitochondrion, plastid	51.21	55.89
KRH05059	Soybean	cytosol, mitochondrion, plastid	50.84	55.49
KRH35993	Soybean	cytosol	49.91	55.26
KRH56674	Soybean	cytosol	48.98	51.07
KRH03791	Soybean	cytosol	48.79	50.97
KRH36100	Soybean	plastid	32.22	37.86

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100775767	MapMan:18.4.24.1.2.3	EMBL:ACUP02001274	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAX25314.1	EnsemblPlantsGene:GLYMA_02G270300	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666
GO:GO:0050790	UniProt:I1JIL3	InterPro:IPR011989	EnsemblPlants:KRH73387	ProteinID:KRH73387	ProteinID:KRH73387.1
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF27	SUPFAM:SSF48371
UniParc:UPI0002336F3A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:45435211..45438514

Molecular Weight (calculated)

61117.2 Da

IEP (calculated)

7.616

GRAVY (calculated)

-0.279

Length

537 amino acids

Sequence
(BLAST)

001: MIKQIFGKIP RKPSKSSHNN SNGEGGFNDG FSLNSSSNNT LLKSNSVSSK SSSSCSVGSR SGNETIAQYY SNQSKKSAPT SGSVMASAAY EALPSFRDVP
101: SSEKQNLFIR KLNMCCVVFD FNDPVKHLKE KDVKRQTLLE LVDYVSSVNS KFNELAMQEM TKMVATNLFR ALPSSNHDGN LEDMGEPDEE EHVLEPAWPH
201: LQIVYEFLFR FVASPETDAK LAKRYIDHSF VLKLLDLFDS EDQRERDYLK TILHRIYGKF MVHRPFIRKA INNIFYRFIF ETEKHSGIAE LLEILGSIIN
301: GFALPLKEEH KLFLARALIP LHKPKCVALY HQQLSYCITQ FVEKDVKLAD TVVRGLLKYW PITNSAKEVM FLSELEEVLE ATQAAEFQRC VIPLFRQIGR
401: CLNSLHFQVA ERALFLWNND HIRNLILQNS KVILPIIFPA MEKNIRGHWN QVVQSLTMNV RKIFSDADQA LFDECLKRFQ EEEINDREKQ EKRESIWKQL
501: EDVAAANAVS NEAILVSRFV SSVAIATSAN QLATAGG

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.