CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g02850.t01	Wine grape	cytosol	69.37	67.88
PGSC0003DMT400008785	Potato	cytosol	57.33	64.37
Solyc01g111790.1.1	Tomato	mitochondrion, plastid	56.89	58.82
GSMUA_Achr3P00600_001	Banana	mitochondrion	49.23	45.18
Zm00001d006254_P001	Maize	cytosol	44.64	44.06
KRG90768	Soybean	extracellular, mitochondrion	8.97	43.62
TraesCS5A01G336800.1	Wheat	cytosol	44.42	43.47
TraesCS5D01G341500.1	Wheat	cytosol	44.42	43.38
EER99281	Sorghum	mitochondrion	44.64	43.31
HORVU5Hr1G084630.1	Barley	cytosol	44.2	43.25
TraesCS5B01G335800.1	Wheat	cytosol	44.2	42.89
Os09t0542700-00	Rice	cytosol	43.11	40.87
KRG96039	Soybean	cytosol, plastid	38.95	38.12
KRH67758	Soybean	plastid	39.17	38.09
KRH19952	Soybean	cytosol	38.51	36.44
KRH32554	Soybean	cytosol	38.73	36.42
KRH61853	Soybean	plastid	38.95	35.89
KRH35993	Soybean	cytosol	37.64	35.46
KRH52526	Soybean	cytosol	38.51	35.41
KRH05059	Soybean	cytosol, mitochondrion, plastid	36.98	34.35
KRH16045	Soybean	cytosol, mitochondrion, plastid	36.98	34.35
KRG94414	Soybean	plastid	37.86	33.08
KRH31415	Soybean	cytosol, plastid	37.42	32.82
KRH56674	Soybean	cytosol	36.98	32.82
KRH03791	Soybean	cytosol	36.54	32.49
KRH14754	Soybean	cytosol, plastid	38.07	32.46
KRH73387	Soybean	cytosol, plastid	37.86	32.22
KRG97478	Soybean	cytosol, plastid	36.32	32.11
KRG94343	Soybean	cytosol, plastid	36.98	31.53
KRH57624	Soybean	cytosol, mitochondrion	36.32	31.09

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100802007	MapMan:18.4.24.1.2.3	EMBL:ACUP02006721	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_10G283500	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1LF64	InterPro:IPR011989	EnsemblPlants:KRH36100	ProteinID:KRH36100	ProteinID:KRH36100.1	PFAM:PF01603
InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF28	SUPFAM:SSF48371	UniParc:UPI000233D21B	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:50414214..50416481

Molecular Weight (calculated)

52941.5 Da

IEP (calculated)

8.346

GRAVY (calculated)

-0.308

Length

457 amino acids

Sequence
(BLAST)

001: MLSQKVSPTP SSTSSPKKNP KTLHEMFLQE SPHFIIPSSP SGNEELLSAI SYCTFVFTFS DPSESPAQRD SKRLQLTRLV SILKSSKKPV HEKVLGPLVA
101: MISANLFRPL PPPSNPTSNS ITELPEEEDP ISIFSPLWSH LQIVYEILLK LVNSTDQKVL REHMNHCFLR NLQALFQSED PRERESLKNV YHKIYSKFIA
201: DRSLMRKWMT EVLLNYVFET EKHPGIGDLL EIWGTIINGF TVPLKEEHKL FLMRVLIPLH KTKGMQVYHR QLAYCVSQFV QKEPMLGGVV VRGILKYWPV
301: TNCQKEILLI GELEDLVENL DPDQYRKLAL PLCTQITKCI NSWNSQVAER ALYVWNNEQF VKMALIGTVE VFTVIVEGME KNLKWHWSKS VRQLTESVKV
401: MLEEMEPDLY SKGLMDMEAK ESVAHQEDIK RKKRWERIEL EAAKNQFLNP RYIRVSY

Best Arabidopsis Sequence Match ( AT3G09880.1 )
(BLAST)

001: MFKKIMKGGH RKPSKSEANE PSSYGIGLPD NRSGPGSNVV VSHASRGALV NSSPSPVTAT PPPPPLGSVE PLPLFRDVPV SERQTLFLRK LQNCCFLFDF
101: TDTIKNARDK EIKRQTLLEL VDFIQSGSSK ISESCQEEMI KMISVNIFRS LPPASHENTG QEPADPEEEE PYLEPSWPHL QLVYELLLRY VVSTDTDTKV
201: AKRYIDHSFV LKLLDLFDSE DPREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRVLIPL
301: HKPKPIVVYH QQLSYCIVQF VEKDYKLADT VIRGLLKYWP VTNCSKENLF LGELEEVLEA TQPVEFQRCM VPLFQQIGRC LTSSHFQVAE RALFLWNNEH
401: IVGLIAQNRS VILPIIYPTL EKNIQSHWNQ AVHGLTTNIK KMFMEMDPEL FEECQRQYEE KQAKSKEVEE QRQYTWKRLA EAAAERDGGG GEEDHMITS

Arabidopsis Description

B'BETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Source:UniProtKB/Swiss-Prot;Acc:O04376]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.