CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97478	Soybean	cytosol, plastid	95.01	95.74
CDX98102	Canola	cytosol, plastid	66.79	75.16
Bra025178.1-P	Field mustard	cytosol, plastid	70.44	73.4
Solyc05g014340.2.1	Tomato	cytosol	69.67	72.31
PGSC0003DMT400045008	Potato	cytosol, plastid	69.48	72.11
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	70.83	71.65
Bra019720.1-P	Field mustard	plastid	67.56	71.4
CDY30030	Canola	plastid	67.95	71.37
CDX83578	Canola	cytosol	66.03	71.37
AT1G13460.2	Thale cress	cytosol, plastid	67.37	71.34
Bra036352.1-P	Field mustard	cytosol, plastid	70.44	69.38
KRG94414	Soybean	plastid	69.48	69.22
Zm00001d043447_P001	Maize	cytosol	22.65	68.6
EER93109	Sorghum	cytosol, plastid	68.33	68.59
HORVU5Hr1G120550.1	Barley	nucleus, plastid	66.79	68.1
TraesCS4A01G341600.1	Wheat	plastid	66.79	68.1
TraesCS5B01G533000.1	Wheat	plastid	66.79	67.84
TraesCS5D01G531300.1	Wheat	plastid	66.6	67.64
HORVU2Hr1G083850.1	Barley	cytosol	64.88	67.6
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	65.26	67.59
Os04t0485100-01	Rice	plasma membrane	66.03	67.58
KXG26587	Sorghum	mitochondrion	65.64	67.06
KRG90768	Soybean	extracellular, mitochondrion	12.09	67.02
TraesCS2D01G341400.3	Wheat	mitochondrion	64.68	67.0
TraesCS2A01G320700.2	Wheat	mitochondrion	64.68	67.0
KRH57624	Soybean	cytosol, mitochondrion	68.52	66.85
CDY13605	Canola	cytosol, plastid	65.26	66.8
Os08t0122000-01	Rice	plasma membrane	65.83	66.47
KRG94343	Soybean	cytosol, plastid	68.33	66.42
Os03t0844500-01	Rice	cytosol	65.83	66.34
TraesCS7D01G310200.1	Wheat	cytosol, plastid	65.64	66.15
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	65.64	66.15
TraesCS7B01G214300.2	Wheat	nucleus	65.45	65.96
OQU79819	Sorghum	cytosol	66.6	65.6
TraesCS7A01G313600.1	Wheat	nucleus	65.07	65.57
AT3G26020.4	Thale cress	cytosol, plastid	66.41	65.41
Os07t0274800-02	Rice	extracellular, plasma membrane	63.72	64.22
KRG96039	Soybean	cytosol, plastid	57.01	63.6
KRH14754	Soybean	cytosol, plastid	64.88	63.06
KRH67758	Soybean	plastid	56.81	62.98
KRH73387	Soybean	cytosol, plastid	64.3	62.38
OQU88848	Sorghum	cytosol	59.5	61.51
HORVU0Hr1G004960.2	Barley	cytosol	58.35	61.17
KRH19952	Soybean	cytosol	56.62	61.08
KRH32554	Soybean	cytosol	56.81	60.91
KRH61853	Soybean	plastid	53.74	56.45
KRH52526	Soybean	cytosol	53.17	55.73
KRH16045	Soybean	cytosol, mitochondrion, plastid	52.4	55.49
KRH05059	Soybean	cytosol, mitochondrion, plastid	52.02	55.08
KRH35993	Soybean	cytosol	51.25	55.05
GSMUA_Achr8P01190_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.15	53.3
KRH56674	Soybean	cytosol	48.75	49.32
KRH03791	Soybean	cytosol	48.56	49.22
KRH36100	Soybean	plastid	32.82	37.42

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100811438	MapMan:18.4.24.1.2.3	EMBL:ACUP02007145	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_11G246900	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790
UniProt:I1LNC5	InterPro:IPR011989	EnsemblPlants:KRH31415	ProteinID:KRH31415	ProteinID:KRH31415.1	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI000233D85B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:33983471..33987850

Molecular Weight (calculated)

59429.8 Da

IEP (calculated)

8.993

GRAVY (calculated)

-0.361

Length

521 amino acids

Sequence
(BLAST)

001: MFKQIFSKLP RKSSKGSEHG GSGRTHHGVT TSSKSSDSVS VTPGGTKPGN SSSAGQNHGN RVPLPNVVNE NNIHNNPNNG NFGSYEALPA FRDVPSSEKP
101: TLFIKKLRMC CVVFDFTDPA KHLKEKEIKR QTLVELVDYV SNANAKFVEN MMQEVVKMVS ANIFRTLSPQ PRESKIVDGV DMDEEEPSMD PAWPHLQIVY
201: ELFLRFVASP ELDAKLAKRY IDQSFILRLL DLFDSEDPRE REYLKMTLHR IYGKFMAHRP FIRKAINNVF FNFIFETEKH NGIAEFLEIL GSIINGFALP
301: LKEEHKLFLV RILIPLHKPK CLAMYHQQLS YCITQFVEKD CKLADTIIRG LLKYWPITNS PKEVMFLGEL EEVLEATQPP EFQRCMVPLF RRIARCLNSP
401: HFQVAERALF LWNNDHIMSL IKQNRKVILP IIFPALERNA RSHWNQAVHG LTLNVRKVFN DVDPDLSKEC LQKFEEDESK KSEVIAGREA TWKRLEELAA
501: KKAASGEAVL IGKAPTRNSA G

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.