CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019720.1-P	Field mustard	plastid	99.78	93.71
CDY30030	Canola	plastid	99.78	93.15
AT1G13460.2	Thale cress	cytosol, plastid	90.28	84.96
CDX83578	Canola	cytosol	79.48	76.35
CDY13605	Canola	cytosol, plastid	79.05	71.91
Solyc05g014340.2.1	Tomato	cytosol	74.73	68.92
PGSC0003DMT400045008	Potato	cytosol, plastid	74.73	68.92
KRH31415	Soybean	cytosol, plastid	75.16	66.79
KRG97478	Soybean	cytosol, plastid	74.3	66.54
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	73.0	65.63
HORVU2Hr1G083850.1	Barley	cytosol	70.41	65.2
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	70.63	65.01
TraesCS2A01G320700.2	Wheat	mitochondrion	70.41	64.81
Os04t0485100-01	Rice	plasma membrane	71.06	64.64
TraesCS2D01G341400.3	Wheat	mitochondrion	70.19	64.61
TraesCS7D01G310200.1	Wheat	cytosol, plastid	71.92	64.41
HORVU5Hr1G120550.1	Barley	nucleus, plastid	71.06	64.38
KXG26587	Sorghum	mitochondrion	70.84	64.31
TraesCS7B01G214300.2	Wheat	nucleus	71.71	64.22
EER93109	Sorghum	cytosol, plastid	71.92	64.16
TraesCS4A01G341600.1	Wheat	plastid	70.63	63.99
TraesCS5D01G531300.1	Wheat	plastid	70.84	63.94
TraesCS5B01G533000.1	Wheat	plastid	70.84	63.94
HORVU7Hr1G074840.1	Barley	mitochondrion, plastid	71.27	63.83
TraesCS7A01G313600.1	Wheat	nucleus	71.27	63.83
CDY22925	Canola	plastid	67.82	63.56
Os03t0844500-01	Rice	cytosol	70.84	63.44
Os08t0122000-01	Rice	plasma membrane	70.63	63.37
OQU79819	Sorghum	cytosol	72.35	63.33
CDY48287	Canola	plastid	67.39	62.9
CDY09766	Canola	mitochondrion, plastid	62.85	62.58
CDY44320	Canola	cytosol, plastid	68.47	62.4
CDX90593	Canola	cytosol, plastid	62.42	62.28
CDY38628	Canola	cytosol, mitochondrion	68.47	62.28
CDX83579	Canola	cytosol	63.5	61.89
CDY13606	Canola	cytosol	63.07	61.6
CDY41574	Canola	cytosol	63.5	60.25
CDY54611	Canola	cytosol	63.5	60.0
Os07t0274800-02	Rice	extracellular, plasma membrane	66.95	59.96
CDX87083	Canola	cytosol	45.57	59.94
HORVU0Hr1G004960.2	Barley	cytosol	63.93	59.56
CDX73997	Canola	cytosol, plastid	62.85	59.51
CDY07942	Canola	cytosol, plastid	62.85	59.27
OQU88848	Sorghum	cytosol	64.36	59.13
CDY50168	Canola	cytosol	20.3	58.39
CDY04885	Canola	cytosol, plastid	60.04	57.68
CDY44370	Canola	cytosol, plastid	59.61	57.14
CDY05497	Canola	mitochondrion, plastid	56.59	54.02
CDY54903	Canola	mitochondrion, plastid	56.37	53.7
CDX88186	Canola	cytosol, plastid	56.8	53.13
CDX80521	Canola	plastid	56.59	52.82
CDX67616	Canola	cytosol	55.51	52.56
CDY07514	Canola	cytosol	55.08	52.15
CDY56962	Canola	cytosol, plastid	55.29	52.03
CDY08231	Canola	mitochondrion	36.07	49.55
CDX73425	Canola	cytosol, plastid	55.72	48.04
CDY67412	Canola	mitochondrion	31.75	45.37
CDY35507	Canola	golgi	28.08	42.9
CDY04189	Canola	cytosol, golgi, nucleus	18.36	37.44
CDY40986	Canola	nucleus, plastid	63.5	30.82
CDX99733	Canola	nucleus, plastid	64.15	29.35

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	GO:A0A078EAV5	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDX98102
ProteinID:CDX98102	ProteinID:CDX98102.1	GO:GO:0000159	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008601
GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	EnsemblPlantsGene:GSBRNA2T00105486001	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF46	SUPFAM:SSF48371	UniParc:UPI0004EDC6AE
SEG:seg	:	:	:	:	:

Description

BnaA06g08530D

Coordinates

chrLK031902:+:1062210..1064481

Molecular Weight (calculated)

53649.7 Da

IEP (calculated)

8.402

GRAVY (calculated)

-0.389

Length

463 amino acids

Sequence
(BLAST)

001: MWKQIISKLP KKSSKNHSSS NATASTSKSS SSSDNGNGIY EALPSFKDVP NAEKQTLFLK KLSLCCVLFD FSDPSKNVKE KEIKRQTLLE LVDYVATANG
101: KFSESVIQEA VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPSWPH LQLVYELLLR FIASPDTETK LAKKYIDQSF VTRLLDLFDS EDPRERDCLK
201: TVLHRVYGKF MVHRPFIRKS INNVFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKEEH KVFLVRALIP LHKPKCLQMY HQQLSYCITQ FVEKDCKLAD
301: TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRRVAR CLNSLHFQVA ERALFLWNND HIENLIKQNC KVILPIIFPA LERNTQKHWN
401: QAVHSLTLNV QKIFNDNDPE FFKECLAKFR ESESKEAEVE AKRQATWKRL EEIGMQKQKS SSS

Best Arabidopsis Sequence Match ( AT1G13460.1 )
(BLAST)

001: MWKQILSKLP KKSSSKNHSS SSSSTSKSSD NGASKSGNSQ TQNAPPVKPS ADSGFKEGNL KGNGNGFTPY EALPGFKDVP NAEKQNLFVR KLSLCCVVFD
101: FSDPTKNVKE KDIKRQTLLE LVDYVASPNG KFSETVIQEV VRMVSVNIFR TLNPQPRENK VIDALDLEEE EPSMDPTWPH LQLVYEILLR LIASPETDTK
201: LAKKYIDQSF VSRLLDLFDS EDPRERDCLK TVLHRIYGKF MVHRPFIRKS INNIFYRFVF ETEKHNGIAE FLEILGSIIN GFALPLKDEH KVFLVRALVP
301: LHKPKSLQMY HQQLSYCITQ FVEKDCKLAD TVIRGLLKSW PVTNSSKEVM FLNELEEVLE ATQPPEFQRC MVPLFRQVAR CLNSLHFQVA ERALFLWNND
401: HIENLIMQNR KVILPIIFPA LERNTQKHWN QAVHSLTLNV QKIFNDIDAE LFKDCLAKFR EDESKEAEIG AKREATWKRL EEIGNQKQKS SL

Arabidopsis Description

B'THETASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8LF36]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.