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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009846.1-P Field mustard plastid 98.99 98.99
CDX80521 Canola plastid 97.58 97.38
AT5G25510.1 Thale cress cytosol, mitochondrion, plastid 88.48 87.6
CDX87083 Canola cytosol 60.4 84.94
CDY54903 Canola mitochondrion, plastid 82.83 84.36
CDY05497 Canola mitochondrion, plastid 82.22 83.92
KRH61853 Soybean plastid 70.1 69.96
KRH52526 Soybean cytosol 69.9 69.62
KRH16045 Soybean cytosol, mitochondrion, plastid 68.89 69.31
VIT_04s0008g04270.t01 Wine grape mitochondrion 68.69 69.11
KRH05059 Soybean cytosol, mitochondrion, plastid 67.88 68.29
PGSC0003DMT400067211 Potato cytosol, plastid 66.67 66.27
Solyc06g065690.2.1 Tomato cytosol, plastid 66.46 66.06
TraesCS1A01G382900.2 Wheat plastid 64.24 63.86
TraesCS1D01G390600.1 Wheat plastid 64.24 63.6
TraesCS1B01G408600.1 Wheat plastid 64.04 63.4
GSMUA_Achr2P08330_001 Banana cytosol, mitochondrion 61.62 63.28
EES03447 Sorghum plastid 63.84 63.2
EES18643 Sorghum plastid 63.84 63.07
Zm00001d038944_P003 Maize plastid 63.03 62.28
HORVU3Hr1G022550.2 Barley cytosol 45.66 58.55
Zm00001d009500_P002 Maize plastid 58.59 58.0
GSMUA_AchrUn_... Banana cytosol 55.15 57.96
CDX98102 Canola cytosol, plastid 53.13 56.8
Os05t0555100-01 Rice plastid 51.52 56.79
GSMUA_Achr6P34510_001 Banana cytosol, plastid 44.44 55.98
GSMUA_Achr8P26100_001 Banana cytosol 53.94 55.62
EES19134 Sorghum plastid 53.13 54.34
Zm00001d037626_P001 Maize plastid 53.33 54.32
Zm00001d039625_P001 Maize mitochondrion, plastid 54.34 54.12
Os05t0178400-01 Rice plasma membrane 53.33 53.77
EES00199 Sorghum cytosol, mitochondrion, plastid 54.34 53.48
CDX90593 Canola cytosol, plastid 50.1 53.45
CDY22925 Canola plastid 53.33 53.44
CDY38628 Canola cytosol, mitochondrion 54.95 53.44
CDY48287 Canola plastid 53.54 53.43
CDY44320 Canola cytosol, plastid 54.75 53.35
CDY30030 Canola plastid 53.33 53.23
TraesCS3A01G121400.1 Wheat plastid 51.92 53.21
Os01t0178400-01 Rice cytosol 22.02 53.17
TraesCS3D01G123500.1 Wheat plastid 51.72 53.0
CDY09766 Canola mitochondrion, plastid 49.49 52.69
TraesCS1A01G118300.2 Wheat cytosol, mitochondrion 51.72 52.67
TraesCS3B01G140800.1 Wheat plastid 51.72 52.67
TraesCS1D01G119400.1 Wheat cytosol, mitochondrion 51.52 52.47
HORVU1Hr1G025690.4 Barley cytosol, mitochondrion 51.31 52.26
TraesCS1B01G138000.1 Wheat cytosol, mitochondrion 51.11 52.06
CDY41574 Canola cytosol 50.91 51.64
HORVU1Hr1G084450.3 Barley plastid 64.24 51.62
CDY13606 Canola cytosol 48.89 51.05
CDY54611 Canola cytosol 50.51 51.02
CDX73997 Canola cytosol, plastid 50.3 50.92
CDY07942 Canola cytosol, plastid 50.51 50.92
CDX83578 Canola cytosol 49.49 50.83
CDX83579 Canola cytosol 48.69 50.74
CDY04885 Canola cytosol, plastid 47.68 48.96
CDY44370 Canola cytosol, plastid 47.47 48.65
CDY13605 Canola cytosol, plastid 48.89 47.54
CDY56962 Canola cytosol, plastid 45.45 45.73
CDX67616 Canola cytosol 44.65 45.19
CDY07514 Canola cytosol 44.24 44.79
CDX73425 Canola cytosol, plastid 45.45 41.9
CDY08231 Canola mitochondrion 28.48 41.84
CDY50168 Canola cytosol 12.93 39.75
CDY67412 Canola mitochondrion 25.45 38.89
CDY04189 Canola cytosol, golgi, nucleus 17.37 37.89
CDY35507 Canola golgi 22.42 36.63
CDY40986 Canola nucleus, plastid 48.28 25.05
CDX99733 Canola nucleus, plastid 48.89 23.91
Protein Annotations
Gene3D:1.25.10.10MapMan:18.4.24.1.2.3GO:A0A078DFZ7InterPro:ARM-likeInterPro:ARM-type_foldEnsemblPlants:CDX88186
ProteinID:CDX88186ProteinID:CDX88186.1GO:GO:0000159GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008601
GO:GO:0009987GO:GO:0019888GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00147646001InterPro:IPR011989PFAM:PF01603
PIRSF:PIRSF028043InterPro:PP2A_B56PANTHER:PTHR10257PANTHER:PTHR10257:SF13SUPFAM:SSF48371UniParc:UPI0004EF3E59
SEG:seg:::::
Description
BnaA06g27770D
Coordinates
chrLK031854:-:1225348..1227333
Molecular Weight (calculated)
56221.5 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.026
Length
495 amino acids
Sequence
(BLAST)
001: MYKIFLRKSK PSKPDSSEEL SPSSSDPVQI PGPNGVVSPP VRSNSGKRMS SAVFPASVVS GIEPLLPFKD VPNSEKLNLF VSKVSLCCVT FDFSDPNKNS
101: IEKLVKRQTL LELLDFVASG SVRFTEPAIL AMCRMCAVNL FRVFPPSYRS SGGENNDDDE PVFDPAWPHL QIVYDLLLKF ITSPCLDAKI AKKYLDNAFV
201: VRLLDLFDSE DPRERECLKT ILHRVYGKFM VHRPFIRRAM SNIFHRFVFE TEKHCGIAEL LEFLGSIVSG FALPLKEEHK IFLWRVLIPL HKPKSLGNYF
301: QQLSFCITQF IDKEPKLGSV VIKGLLKFWP ITNSQKEVMF LGEVEEIVEA MSVVEFEKVM VPLFLRIACC VNSCHFQVSE RALFLWNNDQ IVDLIAHNRQ
401: AILPIMFTAL EKNAENHWNQ SVLNLTLNVR KMFCEMDEAL FMSCHARFRE DEAEQSSAAE KRKETWERLE KAASVKPITG KTAVLVTPLA TSIAC
Best Arabidopsis Sequence Match ( AT5G25510.1 )
(BLAST)
001: MFKQFLSKLP RKSSKSDSGE LNRSSSGPVS SPVQRSGTSG GGSGPVRSNS GKRMSSAVFP ASVVAGIEPL VPFKDVPSSE KLNLFVSKVS LCCVTFDFSD
101: PGKNSIEKDV KRQTLLELLD FVASGSVKFT EPAILAMCRM CAVNLFRVFP PNYRSSSGGE NDDDEPMFDP AWPHLQIVYD LLLKFITSPC LDAKVAKKYL
201: DHAFIVRLLD LFDSEDPRER ECLKTILHRV YGKFMVHRPF VRKSMSNIFY RFVFETEKHS GIAELLEIFG SIVSGFALPL KEEHKIFLWR VLIPLHKPKS
301: VGNYFQQLSY CITQFIDKEP KLGSVVIKGL LKFWPITNSQ KEVMFLGEVE EIVEAMSVME FQKIMVPLFL RIACCVTSSH FQVSERALFL WNNDQIVNLI
401: GHNRQAILPI MFTALEKNAQ NHWNQSVLNL TLNVRKMFCE MDEALFMSCH ARFKEDEAKQ CSAAEKRKEV WARLENAASM KPITGKTAVL VTPRATSIAC
Arabidopsis Description
B'KAPPASerine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Source:UniProtKB/Swiss-Prot;Acc:Q93YV6]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.