Factsheet for TraesCS3D01G123500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G140800.1	Wheat	plastid	99.17	98.56
TraesCS3A01G121400.1	Wheat	plastid	97.72	97.72
HORVU3Hr1G022550.2	Barley	cytosol	78.05	97.67
Zm00001d039625_P001	Maize	mitochondrion, plastid	83.85	81.49
EES00199	Sorghum	cytosol, mitochondrion, plastid	84.47	81.11
Os01t0178400-01	Rice	cytosol	34.37	80.98
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	78.88	78.4
CDX87083	Canola	cytosol	43.48	59.66
TraesCS5D01G394900.1	Wheat	cytosol	12.42	56.07
TraesCS1D01G390600.1	Wheat	plastid	57.97	56.0
VIT_04s0008g04270.t01	Wine grape	mitochondrion	55.9	54.88
KRH61853	Soybean	plastid	55.28	53.83
VIT_11s0016g04500.t01	Wine grape	cytosol	59.21	53.56
CDY54903	Canola	mitochondrion, plastid	53.83	53.5
AT5G25510.1	Thale cress	cytosol, mitochondrion, plastid	55.28	53.4
KRH52526	Soybean	cytosol	54.87	53.32
CDY05497	Canola	mitochondrion, plastid	53.42	53.2
PGSC0003DMT400067211	Potato	cytosol, plastid	54.66	53.01
KRH16045	Soybean	cytosol, mitochondrion, plastid	53.83	52.85
Bra020504.1-P	Field mustard	mitochondrion, plastid	53.21	52.77
KRH05059	Soybean	cytosol, mitochondrion, plastid	53.62	52.64
Solyc06g065690.2.1	Tomato	cytosol, plastid	54.24	52.61
Bra009846.1-P	Field mustard	plastid	53.42	52.12
CDX88186	Canola	cytosol, plastid	53.0	51.72
CDX80521	Canola	plastid	53.0	51.61
KRH56674	Soybean	cytosol	54.04	50.68
TraesCS2D01G341400.3	Wheat	mitochondrion	52.59	50.5
PGSC0003DMT400002753	Potato	plastid	52.59	50.2
Solyc12g006920.1.1	Tomato	plastid	52.38	50.0
KRH03791	Soybean	cytosol	53.21	50.0
TraesCS5D01G290200.1	Wheat	cytosol	12.63	48.03
TraesCS7D01G310200.1	Wheat	cytosol, plastid	51.35	47.97
TraesCS4D01G023700.1	Wheat	mitochondrion	50.1	46.9
TraesCS5D01G531300.1	Wheat	plastid	49.07	46.2
TraesCS5D01G341500.1	Wheat	cytosol	32.71	33.76

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	InterPro:IPR011989	PFAM:PF01603
PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF16	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS3D01G123500
EnsemblPlants:TraesCS3D01G123500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:81364065..81366781

Molecular Weight (calculated)

54999.3 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.326

Length

483 amino acids

Sequence
(BLAST)

001: MWKQFIGKLS WKSLKSGPGG NGGGGSPTAK SNPMSPRENG AFGKPPASPR SPSGAAGAEG RSREDAFIEK VTICCTVYDF TDRGKDSPEK ERKRQVLMSL
101: VDSIGAAEEP LTEAMMSACV RMFAVNLFRV FPPKVRSGTT TSETEEDEPF FDPSWYHLQV VYELLLRFVT SPFVDPKVAR KYVDSSFISK LLDLFDSDDP
201: RERDCLKTVL HRIYGKFMGN RPFIRKAVSN IFYRFVSEAD HHNGISELLE VFGSVISGFA KPLKEEHKLF LWKALIPLHK PKTVGVYLPQ LTYCITQFIE
301: KEPKLAGTVI RGLLKYWPVT NSQKEMMFLG ELEEVLELID MAEFQKCMVP LFRRIATCLN SSHFQVAERA LFLWNNEHLF DMISQNRQVI VPIVYPALER
401: NARLHWNQSV LNVTMNVRKM FFDMDERLLL TCQSNFQADE EKRAAAEEHR RLTWEQLERN ADPAFRPANA PPSSAPPRVP TVT

Best Arabidopsis Sequence Match ( AT4G15415.1 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.