Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G398300.1 | Wheat | cytosol | 94.39 | 94.39 |
| TraesCS5D01G290200.1 | Wheat | cytosol | 78.5 | 66.14 |
| TraesCS5D01G531300.1 | Wheat | plastid | 70.09 | 14.62 |
| TraesCS7D01G310200.1 | Wheat | cytosol, plastid | 67.29 | 13.93 |
| Zm00001d049469_P001 | Maize | mitochondrion | 23.36 | 13.74 |
| TraesCS2D01G341400.3 | Wheat | mitochondrion | 64.49 | 13.72 |
| TraesCS3D01G123500.1 | Wheat | plastid | 56.07 | 12.42 |
| TraesCS4D01G023700.1 | Wheat | mitochondrion | 59.81 | 12.4 |
| TraesCS1D01G119400.1 | Wheat | cytosol, mitochondrion | 55.14 | 12.14 |
| TraesCS1D01G390600.1 | Wheat | plastid | 55.14 | 11.8 |
| TraesCS5D01G341500.1 | Wheat | cytosol | 34.58 | 7.91 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000159 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019888 | GO:GO:0030234 | InterPro:IPR011989 | PFAM:PF01603 |
| InterPro:PP2A_B56 | PANTHER:PTHR10257 | PANTHER:PTHR10257:SF46 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS5D01G394900 | EnsemblPlants:TraesCS5D01G394900.1 |
Description
No Description!
Coordinates
chr5D:+:462802638..462803120
Molecular Weight (calculated)
12520.1 Da
IEP (calculated)
6.325
GRAVY (calculated)
-0.325
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHQQLSYCI TQFVEKDCKL PYTVITGLLK YWPIRNNTKE VMCLGELEEI LEATQPAEFQ KCMVPLFRQI AGCLNNSHFQ DCLGYQAENC SWHGCQSWLL
101: HWSKPEP
101: HWSKPEP
001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
Arabidopsis Description
Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.