Factsheet for TraesCS5D01G531300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G533000.1	Wheat	plastid	99.03	99.03
TraesCS4A01G341600.1	Wheat	plastid	98.25	98.63
HORVU5Hr1G120550.1	Barley	nucleus, plastid	97.08	97.46
Os03t0844500-01	Rice	cytosol	87.33	86.65
EER93109	Sorghum	cytosol, plastid	84.99	84.01
GSMUA_Achr8P08980_001	Banana	cytosol, mitochondrion	63.74	74.49
Zm00001d034817_P001	Maize	cytosol	83.24	71.89
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	56.53	71.43
CDX98102	Canola	cytosol, plastid	63.94	70.84
TraesCS5D01G394900.1	Wheat	cytosol	14.62	70.09
Solyc02g067980.2.1	Tomato	nucleus	71.34	69.85
GSMUA_Achr5P25450_001	Banana	cytosol, mitochondrion, nucleus, plastid	65.5	68.85
Solyc05g014340.2.1	Tomato	cytosol	67.06	68.53
PGSC0003DMT400045008	Potato	cytosol, plastid	66.86	68.33
PGSC0003DMT400052115	Potato	plastid	69.2	68.27
GSMUA_Achr8P32030_001	Banana	cytosol	63.94	68.19
AT1G13460.2	Thale cress	cytosol, plastid	65.3	68.09
TraesCS7D01G310200.1	Wheat	cytosol, plastid	68.62	68.09
PGSC0003DMT400017950	Potato	plastid	69.4	67.94
GSMUA_AchrUn_...	Banana	cytosol	34.89	67.8
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	68.03	67.77
Solyc02g093800.2.1	Tomato	plastid	69.01	67.69
KRG94414	Soybean	plastid	68.81	67.5
TraesCS2D01G341400.3	Wheat	mitochondrion	65.89	67.2
Bra025178.1-P	Field mustard	cytosol, plastid	65.3	67.0
Bra019720.1-P	Field mustard	plastid	64.13	66.73
CDY30030	Canola	plastid	64.52	66.73
KRH31415	Soybean	cytosol, plastid	67.64	66.6
KRG97478	Soybean	cytosol, plastid	66.86	66.34
KRH57624	Soybean	cytosol, mitochondrion	69.01	66.29
VIT_14s0219g00010.t01	Wine grape	cytosol	16.37	65.12
KRG94343	Soybean	cytosol, plastid	67.84	64.93
CDX83578	Canola	cytosol	60.82	64.73
Bra036352.1-P	Field mustard	cytosol, plastid	65.69	63.71
TraesCS5D01G290200.1	Wheat	cytosol	15.4	62.2
CDY13605	Canola	cytosol, plastid	60.43	60.9
AT3G26020.4	Thale cress	cytosol, plastid	61.4	59.55
PGSC0003DMT400034814	Potato	cytosol	23.78	57.82
TraesCS4D01G023700.1	Wheat	mitochondrion	55.36	55.04
TraesCS1D01G390600.1	Wheat	plastid	52.63	54.0
CDY50168	Canola	cytosol	15.98	50.93
TraesCS1D01G119400.1	Wheat	cytosol, mitochondrion	47.76	50.41
TraesCS3D01G123500.1	Wheat	plastid	46.2	49.07
TraesCS5D01G341500.1	Wheat	cytosol	31.19	34.19

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0019888	GO:GO:0030234	InterPro:IPR011989
PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257	PANTHER:PTHR10257:SF18	SUPFAM:SSF48371
EnsemblPlantsGene:TraesCS5D01G531300	EnsemblPlants:TraesCS5D01G531300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:546918580..546921378

Molecular Weight (calculated)

58574.6 Da

IEP (calculated)

8.810

GRAVY (calculated)

-0.383

Length

513 amino acids

Sequence
(BLAST)

001: MIKQILGRFP KKPSKSGDKD PIGRSGASVS NPPRGVERAA SGHTPIISSS GLSYGSGQQH PGNGNNPRVN NGNSSAFELL PGFKDVPNAE KNNLFVKKLN
101: LCCVTFDFSD PTKSIKEKEV KRQTLLELVD YVASANQKFP EIVMQETTRM VSVNLFRTLT TPPRENNISA YDLDEDEPVM DPAWSHLQIV YELFLRFIQS
201: PETDAKLAKR YIDHSFVLRL LDLFDSEDPR EREYLKMILH RVYGKFMVHR PVIRKAINNT FYQFIYETEK HNGIAELLEI LGSIINGFAL PLKEEHKLFL
301: IRALIPLHKP KCIAMYHQQL SYCITQFVEK DCKLSDTVIR GLLKYWPITN STKEVMFLGE LEEILEATQP AEFQKCMVPL FRQIARCLNS SHFQVAERSL
401: FLWNNDHIEG LIKQNSKVIL PIIFPALERN SSGHWNPAVQ SLTLNVRKLF SDHDAGLYTE CLRKYEEAKA KEKENKLKQE ATWKRLEEIA SSRATSGEAV
501: LVHRTLPRQS SAV

Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)

001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS

Arabidopsis Description

Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.