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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13605 Canola cytosol, plastid 95.02 89.98
AT3G26020.4 Thale cress cytosol, plastid 92.12 83.93
Bra036352.1-P Field mustard cytosol, plastid 91.29 83.18
CDX98102 Canola cytosol, plastid 76.35 79.48
CDY30030 Canola plastid 78.63 76.41
Solyc05g014340.2.1 Tomato cytosol 70.12 67.33
PGSC0003DMT400045008 Potato cytosol, plastid 69.5 66.73
KRG97478 Soybean cytosol, plastid 70.95 66.15
KRH31415 Soybean cytosol, plastid 71.37 66.03
VIT_01s0010g02350.t01 Wine grape cytosol, mitochondrion, plastid 69.92 65.44
HORVU2Hr1G083850.1 Barley cytosol 66.39 64.0
Os04t0485100-01 Rice plasma membrane 67.01 63.46
TraesCS2A01G320700.2 Wheat mitochondrion 65.77 63.02
TraesCS2B01G362000.2 Wheat cytosol, mitochondrion 65.77 63.02
TraesCS2D01G341400.3 Wheat mitochondrion 65.77 63.02
KXG26587 Sorghum mitochondrion 66.18 62.55
CDX90593 Canola cytosol, plastid 60.17 62.5
EER93109 Sorghum cytosol, plastid 67.22 62.43
CDY09766 Canola mitochondrion, plastid 60.17 62.37
Os08t0122000-01 Rice plasma membrane 66.6 62.21
TraesCS7B01G214300.2 Wheat nucleus 66.6 62.09
HORVU7Hr1G074840.1 Barley mitochondrion, plastid 66.39 61.9
TraesCS7D01G310200.1 Wheat cytosol, plastid 66.39 61.9
Os03t0844500-01 Rice cytosol 66.18 61.7
TraesCS7A01G313600.1 Wheat nucleus 65.98 61.51
HORVU5Hr1G120550.1 Barley nucleus, plastid 64.73 61.06
TraesCS4A01G341600.1 Wheat plastid 64.52 60.86
TraesCS5D01G531300.1 Wheat plastid 64.73 60.82
CDY22925 Canola plastid 62.24 60.73
TraesCS5B01G533000.1 Wheat plastid 64.52 60.62
CDY48287 Canola plastid 62.03 60.28
OQU79819 Sorghum cytosol 65.98 60.11
CDY44320 Canola cytosol, plastid 62.86 59.65
CDY38628 Canola cytosol, mitochondrion 62.66 59.33
Os07t0274800-02 Rice extracellular, plasma membrane 62.45 58.22
CDX83579 Canola cytosol 57.05 57.89
CDY13606 Canola cytosol 56.85 57.81
CDY41574 Canola cytosol 58.3 57.58
OQU88848 Sorghum cytosol 59.54 56.94
CDY54611 Canola cytosol 57.88 56.94
HORVU0Hr1G004960.2 Barley cytosol 58.51 56.74
CDY07942 Canola cytosol, plastid 57.26 56.21
CDX73997 Canola cytosol, plastid 56.85 56.03
CDY04885 Canola cytosol, plastid 54.15 54.15
CDX87083 Canola cytosol 39.42 53.98
CDY44370 Canola cytosol, plastid 53.32 53.21
CDY50168 Canola cytosol 17.22 51.55
CDY05497 Canola mitochondrion, plastid 51.66 51.34
CDY54903 Canola mitochondrion, plastid 51.45 51.03
CDX67616 Canola cytosol 51.24 50.51
CDY07514 Canola cytosol 50.83 50.1
CDX88186 Canola cytosol, plastid 50.83 49.49
CDX80521 Canola plastid 50.83 49.4
CDY56962 Canola cytosol, plastid 50.41 49.39
CDX73425 Canola cytosol, plastid 51.04 45.81
CDY08231 Canola mitochondrion 29.46 42.14
CDY04189 Canola cytosol, golgi, nucleus 18.67 39.65
CDY67412 Canola mitochondrion 25.93 38.58
CDY35507 Canola golgi 22.2 35.31
CDY40986 Canola nucleus, plastid 57.05 28.83
CDX99733 Canola nucleus, plastid 57.68 27.47
Protein Annotations
Gene3D:1.25.10.10MapMan:18.4.24.1.2.3GO:A0A078D8F8InterPro:ARM-likeInterPro:ARM-type_foldEnsemblPlants:CDX83578
ProteinID:CDX83578ProteinID:CDX83578.1GO:GO:0000159GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008601
GO:GO:0009987GO:GO:0019888GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00139234001InterPro:IPR011989PFAM:PF01603
PIRSF:PIRSF028043InterPro:PP2A_B56PANTHER:PTHR10257PANTHER:PTHR10257:SF46SUPFAM:SSF48371UniParc:UPI0004EE42BB
SEG:seg:::::
Description
BnaC07g23180D
Coordinates
chrLK031833:+:810836..813637
Molecular Weight (calculated)
55549.3 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.589
Length
482 amino acids
Sequence
(BLAST)
001: MWKQILSKLP KKSSKNEHHH HRGREREREH GGGHSSSSSH ASTSKSSDNG HGKSANSHTK NAPSGGRSAA SSDSGFKGGN NNNNNGGVFT PYEALPSFKD
101: VPNTEKQNLF IKKLNLCRVV FDFTDPTKNI KEKDIKRQTL LELVDYVNSA NGKFSEVSIQ EVVRMVSANI FRTLNPQPRE NKVIDALDLE EEEPSMDLAW
201: PHLQLVYELF LRFVASPDTD TKLAKRYIDQ SFVLRLLDLF DSEDPRERDC LKTILHRIYG KFMVHRPFIR KSINNIFYRF VFETEKHNGI AEFLEILGSI
301: INGFALPLKD EHKFVEKDCK LADTVIRGLL KYWPVTNSSK EVMFLNELEE VLEATQPPEF QRCMVPLFRQ IARCLNSLHF QVAERALFLW NNNHIENLIM
401: QSRKVILPII FPALERNAEK HWNQAVHSLT LNVRKIFNDL DPELFKDCLA KFKEDESKEG ETKAKREATW KRLEEVGMRK AS
Best Arabidopsis Sequence Match ( AT3G26020.6 )
(BLAST)
001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
Arabidopsis Description
Protein phosphatase 2A regulatory B subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC4]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.