CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003256_P001	Maize	cytosol, mitochondrion	97.25	97.25
Zm00001d025714_P001	Maize	mitochondrion	96.08	96.08
Os04t0485100-01	Rice	plasma membrane	92.55	92.73
TraesCS2A01G320700.2	Wheat	mitochondrion	87.84	89.07
TraesCS2B01G362000.2	Wheat	cytosol, mitochondrion	87.84	89.07
TraesCS2D01G341400.3	Wheat	mitochondrion	87.84	89.07
HORVU2Hr1G083850.1	Barley	cytosol	87.25	89.0
VIT_14s0171g00530.t01	Wine grape	cytosol, plastid	59.02	74.14
HORVU0Hr1G004960.2	Barley	cytosol	71.76	73.64
Solyc02g067980.2.1	Tomato	nucleus	73.73	71.76
CDX98102	Canola	cytosol, plastid	64.31	70.84
PGSC0003DMT400017950	Potato	plastid	71.96	70.04
Solyc02g093800.2.1	Tomato	plastid	71.57	69.79
PGSC0003DMT400052115	Potato	plastid	70.98	69.62
Bra025178.1-P	Field mustard	cytosol, plastid	67.84	69.2
VIT_01s0010g02350.t01	Wine grape	cytosol, mitochondrion, plastid	69.8	69.13
Solyc05g014340.2.1	Tomato	cytosol	67.84	68.92
PGSC0003DMT400045008	Potato	cytosol, plastid	67.25	68.33
EER93109	Sorghum	cytosol, plastid	69.41	68.21
OQU79819	Sorghum	cytosol	70.59	68.05
AT1G13460.2	Thale cress	cytosol, plastid	65.49	67.89
KRG94414	Soybean	plastid	69.22	67.5
KRH57624	Soybean	cytosol, mitochondrion	70.2	67.04
KRG94343	Soybean	cytosol, plastid	69.8	66.42
CDY30030	Canola	plastid	64.51	66.33
Bra019720.1-P	Field mustard	plastid	64.12	66.33
CDX83578	Canola	cytosol	62.55	66.18
KRH31415	Soybean	cytosol, plastid	67.06	65.64
Bra036352.1-P	Field mustard	cytosol, plastid	68.04	65.6
KRG97478	Soybean	cytosol, plastid	66.47	65.57
CDY13605	Canola	cytosol, plastid	62.55	62.67
OQU88848	Sorghum	cytosol	60.78	61.51
AT3G26020.4	Thale cress	cytosol, plastid	63.33	61.06
VIT_14s0219g00010.t01	Wine grape	cytosol	15.29	60.47
PGSC0003DMT400034814	Potato	cytosol	24.31	58.77
EES03447	Sorghum	plastid	52.35	53.4
EES18643	Sorghum	plastid	52.35	53.29
KXG37844	Sorghum	plastid	54.51	53.05
EES19134	Sorghum	plastid	50.2	52.89
EES00199	Sorghum	cytosol, mitochondrion, plastid	50.98	51.69
CDY50168	Canola	cytosol	15.29	48.45
EER99281	Sorghum	mitochondrion	33.53	36.31

Protein Annotations

Gene3D:1.25.10.10	MapMan:18.4.24.1.2.3	UniProt:A0A1B6PLP3	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0000159
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0019888	GO:GO:0030234	GO:GO:0043666	GO:GO:0050790	InterPro:IPR011989	EnsemblPlants:KXG26587
ProteinID:KXG26587	ProteinID:KXG26587.1	PFAM:PF01603	PIRSF:PIRSF028043	InterPro:PP2A_B56	PANTHER:PTHR10257
PANTHER:PTHR10257:SF46	EnsemblPlantsGene:SORBI_3006G126100	SUPFAM:SSF48371	UniParc:UPI00081ADD0F	:	:

Description

hypothetical protein

Coordinates

chr6:-:49132410..49136299

Molecular Weight (calculated)

58140.9 Da

IEP (calculated)

7.852

GRAVY (calculated)

-0.381

Length

510 amino acids

Sequence
(BLAST)

001: MIKQILGRLP RKPGKAGDSR EAAAAGNGTE PSNSYSVARS MDPGNKRAGN GDYPVPSGVT PNPVMNGAVV YHSNEPLPAF KDVPASEKQN LFVKKVNLCC
101: AVYDFADPTK NLKEKEVKRQ TLMELVDYVT SANGKFSEVV MLEITKMVSI NLFRTSSPTP RENKAIEGVD LEEDEPLMDP AWSHLQIVYE VFLRFVASQE
201: TDAKLAKRYI DHSFILRLLD LFDSEDPRER DYLKTILHRI YGKFMVHRPF IRKAINNIFY RFIFETEKHN GVAELLEILG SIINGFALPL KEEHKLFLVR
301: ALIPLHKPKC VSMYHQQLSY CITQFVEKDC KLADTVIRGL LKYWPVTNSS KEVMFLGELE EVLEATQLAE FQRCMVPLFR QIARSMNSSH FQVAERALFL
401: WNNDHIENLI KQNYKVLLPI IYPALERNSR GHWNQAVRSL TLNVRKIFSD HDSAFFGECV QRFNDEEVKQ EESDSKREAL WKRLEEMAAS KPGENNPLGA
501: PNGKPSQAAG

Best Arabidopsis Sequence Match ( AT4G15415.5 )
(BLAST)

001: MIKQIFGKLP RKPSKSSHND SNPNGEGGVN SYYIPNSGIS SISKPSSKSS ASNSNGANGT VIAPSSTSSN RTNQVNGVYE ALPSFRDVPT SEKPNLFIKK
101: LSMCCVVFDF NDPSKNLREK EIKRQTLLEL VDYIATVSTK LSDAAMQEIA KVAVVNLFRT FPSANHESKI LETLDVDDEE PALEPAWPHL QVVYELLLRF
201: VASPMTDAKL AKRYIDHSFV LKLLDLFDSE DQREREYLKT ILHRIYGKFM VHRPFIRKAI NNIFYRFIFE TEKHNGIAEL LEILGSIING FALPLKEEHK
301: LFLIRALIPL HRPKCASAYH QQLSYCIVQF VEKDFKLADT VIRGLLKYWP VTNSSKEVMF LGELEEVLEA TQAAEFQRCM VPLFRQIARC LNSSHFQVAE
401: RALFLWNNDH IRNLITQNHK VIMPIVFPAM ERNTRGHWNQ AVQSLTLNVR KVMAETDQIL FDECLAKFQE DEANETEVVA KREATWKLLE ELAASKSVSN
501: EAVLVPRFSS SVTLATGKTS GS

Arabidopsis Description

B'GAMMASerine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q8RW96]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.